Domain ID e4bimB3

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  • A: beta barrels
  • X: Barrel domain in heme-dependent catalases
  • H: Barrel domain in heme-dependent catalases
  • T: Barrel domain in heme-dependent catalases
  • F: Catalase
UID: 001710381
Type: Automatic domain
Parent: e1gweA1
Range: B:38-476
Ligands: HEM
PDB: 4bim
PDB Description: CATALASE 3
UniProt: Q9C169
Hsap BLAST neighbor: P04040
Species: Neurospora crassa

Structure of domain e4bimB3

Domains in the same chain:

e4bimB3 B:38-476 Barrel domain in heme-dependent catalases Barrel domain in heme-dependent catalases Barrel domain in heme-dependent catalases
e4bimB7 B:477-563 Second alpha-helical domain in heme-dependent catalases Second alpha-helical domain in heme-dependent catalases Second alpha-helical domain in heme-dependent catalases
e4bimB9 B:564-716 Flavodoxin-like Class I glutamine amidotransferase-like Class I glutamine amidotransferase-like

Domains in the same PDB:

e4bimA3 A:36-476 Barrel domain in heme-dependent catalases Barrel domain in heme-dependent catalases Barrel domain in heme-dependent catalases
e4bimA6 A:477-563 Second alpha-helical domain in heme-dependent catalases Second alpha-helical domain in heme-dependent catalases Second alpha-helical domain in heme-dependent catalases
e4bimA7 A:564-716 Flavodoxin-like Class I glutamine amidotransferase-like Class I glutamine amidotransferase-like
e4bimB3 B:38-476 Barrel domain in heme-dependent catalases Barrel domain in heme-dependent catalases Barrel domain in heme-dependent catalases
e4bimB7 B:477-563 Second alpha-helical domain in heme-dependent catalases Second alpha-helical domain in heme-dependent catalases Second alpha-helical domain in heme-dependent catalases
e4bimB9 B:564-716 Flavodoxin-like Class I glutamine amidotransferase-like Class I glutamine amidotransferase-like
e4bimC3 C:36-476 Barrel domain in heme-dependent catalases Barrel domain in heme-dependent catalases Barrel domain in heme-dependent catalases
e4bimC6 C:477-563 Second alpha-helical domain in heme-dependent catalases Second alpha-helical domain in heme-dependent catalases Second alpha-helical domain in heme-dependent catalases
e4bimC7 C:564-716 Flavodoxin-like Class I glutamine amidotransferase-like Class I glutamine amidotransferase-like
e4bimD3 D:37-476 Barrel domain in heme-dependent catalases Barrel domain in heme-dependent catalases Barrel domain in heme-dependent catalases
e4bimD10 D:477-563 Second alpha-helical domain in heme-dependent catalases Second alpha-helical domain in heme-dependent catalases Second alpha-helical domain in heme-dependent catalases
e4bimD12 D:564-716 Flavodoxin-like Class I glutamine amidotransferase-like Class I glutamine amidotransferase-like

Structural contacts of domain e4bimB3 of H-group "Barrel domain in heme-dependent catalases":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4bimA3 B:x,y,z->A:X,Y,Z Barrel domain in heme-dependent catalases Interaction Interface Pymol
e4bimA7 B:x,y,z->A:X,Y,Z Class I glutamine amidotransferase-like Interaction Interface Pymol
e4bimA3 B:x,y,z->A:-Y,-X,-Z+1/2 Barrel domain in heme-dependent catalases Interaction Interface Pymol
e4bimB3 B:x,y,z->B:-Y,-X,-Z+1/2 Barrel domain in heme-dependent catalases Interaction Interface Pymol
e4bimB7 B:x,y,z->B:-Y,-X,-Z+1/2 Second alpha-helical domain in heme-dependent catalases Interaction Interface Pymol
e4bimB3 B:-Y,-X,-Z+1/2->B:x,y,z Barrel domain in heme-dependent catalases Interaction Interface Pymol
e4bimB7 B:-Y,-X,-Z+1/2->B:x,y,z Second alpha-helical domain in heme-dependent catalases Interaction Interface Pymol
e4bimC3 B:X,Y,Z->C:x,y,z Barrel domain in heme-dependent catalases Interaction Interface Pymol
e4bimC7 B:X,Y,Z->C:x,y,z Class I glutamine amidotransferase-like Interaction Interface Pymol
e4bimD10 B:X,Y,Z->D:x,y,z Second alpha-helical domain in heme-dependent catalases Interaction Interface Pymol