ECOD: domain e4bj5B3

Domain ID e4bj5B3

A: a/b three-layered sandwiches
X: P-loop domains-like
H: P-loop domains-related
T: P-loop containing nucleoside triphosphate hydrolases
F: RIF2_ASCE

UID:	001344560
Type:	Automatic domain
Parent:	e4bj6.1
Range:	B:63-151,B:188-282
Ligands:	SO4
PDB:	4bj5
PDB Description:	PROTEIN RIF2
UniProt:	Q06208
Species:	Saccharomyces cerevisiae

Domains in the same chain:

Download Pymol

e4bj5B3	B:63-151,B:188-282	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e4bj5B2	B:283-389	Histone-like	Histone-related	AAA+ ATPase lid domain

Domains in the same PDB:

e4bj5A3	A:61-151,A:188-282	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e4bj5A2	A:283-388	Histone-like	Histone-related	AAA+ ATPase lid domain
e4bj5B3	B:63-151,B:188-282	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e4bj5B2	B:283-389	Histone-like	Histone-related	AAA+ ATPase lid domain
e4bj5C4	C:675-783	Repressor activator protein 1 (RAP1) helical bundle domain	Repressor activator protein 1 (RAP1) helical bundle domain	Repressor activator protein 1 (RAP1) helical bundle domain
e4bj5C3	C:784-825	Rap1 C-terminal domain	Rap1 C-terminal domain	Rap1 C-terminal domain
e4bj5E4	E:675-783	Repressor activator protein 1 (RAP1) helical bundle domain	Repressor activator protein 1 (RAP1) helical bundle domain	Repressor activator protein 1 (RAP1) helical bundle domain
e4bj5E3	E:784-825	Rap1 C-terminal domain	Rap1 C-terminal domain	Rap1 C-terminal domain

Structural contacts of domain e4bj5B3 of H-group "P-loop domains-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e4bj5C4	B:X,Y,Z->C:x,y,z	Repressor activator protein 1 (RAP1) helical bundle domain	Interaction Interface Pymol
e4bj5A3	B:x,y,z->A:X-1/2,-Y-1/2,-Z	P-loop domains-related	Interaction Interface Pymol
e4bj5A3	B:x,y,z->A:X,Y,Z	P-loop domains-related	Interaction Interface Pymol
e4bj5A2	B:x,y,z->A:-X-1/2,-Y,Z-1/2	Histone-related	Interaction Interface Pymol
e4bj5A3	B:x,y,z->A:-X-1/2,-Y,Z-1/2	P-loop domains-related	Interaction Interface Pymol
e4bj5C3	B:-X-1,Y-1/2,-Z+1/2->C:x,y,z	Rap1 C-terminal domain	Interaction Interface Pymol