Domain ID e4bl3B2

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  • A: beta complex topology
  • X: Penicillin binding protein dimerisation domain
  • H: Penicillin binding protein dimerisation domain
  • T: Penicillin binding protein dimerisation domain
  • F: PBP_dimer
UID: 001292060
Type: Automatic domain
Parent: e1rp5A6
Range: B:139-167,B:239-326
Ligands: CD CL MUR
PDB: 4bl3
PDB Description: PENICILLIN BINDING PROTEIN 2 PRIME
UniProt: Q54113
Species: Staphylococcus aureus

Structure of domain e4bl3B2

Domains in the same chain:

e4bl3B4 B:26-138 Cystatin-like NTF2-like NTF2-like
e4bl3B2 B:139-167,B:239-326 Penicillin binding protein dimerisation domain Penicillin binding protein dimerisation domain Penicillin binding protein dimerisation domain
e4bl3B3 B:168-238 ClpS-like Penicillin binding protein ClpS-like domain Penicillin binding protein ClpS-like domain
e4bl3B5 B:327-398,B:525-668 Profilin-like a+b domain in beta-lactamase/transpeptidase-like proteins a+b domain in beta-lactamase/transpeptidase-like proteins
e4bl3B1 B:399-524 alpha-helical domain in beta-lactamase/transpeptidase-like proteins alpha-helical domain in beta-lactamase/transpeptidase-like proteins alpha-helical domain in beta-lactamase/transpeptidase-like proteins

Domains in the same PDB:

e4bl3A4 A:26-138 Cystatin-like NTF2-like NTF2-like
e4bl3A2 A:139-167,A:239-326 Penicillin binding protein dimerisation domain Penicillin binding protein dimerisation domain Penicillin binding protein dimerisation domain
e4bl3A3 A:168-238 ClpS-like Penicillin binding protein ClpS-like domain Penicillin binding protein ClpS-like domain
e4bl3A5 A:327-398,A:525-668 Profilin-like a+b domain in beta-lactamase/transpeptidase-like proteins a+b domain in beta-lactamase/transpeptidase-like proteins
e4bl3A1 A:399-524 alpha-helical domain in beta-lactamase/transpeptidase-like proteins alpha-helical domain in beta-lactamase/transpeptidase-like proteins alpha-helical domain in beta-lactamase/transpeptidase-like proteins
e4bl3B4 B:26-138 Cystatin-like NTF2-like NTF2-like
e4bl3B2 B:139-167,B:239-326 Penicillin binding protein dimerisation domain Penicillin binding protein dimerisation domain Penicillin binding protein dimerisation domain
e4bl3B3 B:168-238 ClpS-like Penicillin binding protein ClpS-like domain Penicillin binding protein ClpS-like domain
e4bl3B5 B:327-398,B:525-668 Profilin-like a+b domain in beta-lactamase/transpeptidase-like proteins a+b domain in beta-lactamase/transpeptidase-like proteins
e4bl3B1 B:399-524 alpha-helical domain in beta-lactamase/transpeptidase-like proteins alpha-helical domain in beta-lactamase/transpeptidase-like proteins alpha-helical domain in beta-lactamase/transpeptidase-like proteins

Structural contacts of domain e4bl3B2 of H-group "Penicillin binding protein dimerisation domain":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4bl3A4 B:x,y,z->A:X,Y,Z NTF2-like Interaction Interface Pymol
e4bl3A5 B:x,y,z->A:X,Y,Z a+b domain in beta-lactamase/transpeptidase-like proteins Interaction Interface Pymol
e4bl3A3 B:x,y,z->A:X,Y,Z Penicillin binding protein ClpS-like domain Interaction Interface Pymol
e4bl3A2 B:x,y,z->A:X,Y,Z Penicillin binding protein dimerisation domain Interaction Interface Pymol
e4bl3A5 B:-X,Y-1/2,-Z+1/2->A:x,y,z a+b domain in beta-lactamase/transpeptidase-like proteins Interaction Interface Pymol
e4bl3A1 B:-X,Y-1/2,-Z+1/2->A:x,y,z alpha-helical domain in beta-lactamase/transpeptidase-like proteins Interaction Interface Pymol