Domain ID e4bogW5

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  • A: beta sandwiches
  • X: Immunoglobulin-like beta-sandwich
  • H: Nicotinic receptor ligand binding domain-like
  • T: Nicotinic receptor ligand binding domain-like
  • F: Neur_chan_LBD
UID: 001279621
Type: Automatic domain
Parent: e1uw6A1
Range: W:1-224
PDB: 4bog
PDB Description: Acetylcholine receptor delta subunit
UniProt: Q6S3H8
Hsap BLAST neighbor: Q07001
Species: Torpedo marmorata

Structure of domain e4bogW5

Domains in the same chain:

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e4bogW5 W:1-224 Immunoglobulin-like beta-sandwich Nicotinic receptor ligand binding domain-like Nicotinic receptor ligand binding domain-like
e4bogW6 W:224-320,W:421-485 Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore

Domains in the same PDB:

e4bog01 0:1-217 Immunoglobulin-like beta-sandwich Nicotinic receptor ligand binding domain-like Nicotinic receptor ligand binding domain-like
e4bog02 0:217-312,0:403-469 Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore
e4bog15 1:1-224 Immunoglobulin-like beta-sandwich Nicotinic receptor ligand binding domain-like Nicotinic receptor ligand binding domain-like
e4bog16 1:224-320,1:421-485 Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore
e4bog21 2:1-209 Immunoglobulin-like beta-sandwich Nicotinic receptor ligand binding domain-like Nicotinic receptor ligand binding domain-like
e4bog22 2:210-306,2:374-437 Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore
e4bog34 3:1-216 Immunoglobulin-like beta-sandwich Nicotinic receptor ligand binding domain-like Nicotinic receptor ligand binding domain-like
e4bog33 3:217-314,3:414-477 Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore
e4bogA2 A:1-209 Immunoglobulin-like beta-sandwich Nicotinic receptor ligand binding domain-like Nicotinic receptor ligand binding domain-like
e4bogA1 A:210-306,A:374-437 Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore
e4bogB4 B:1-215 Immunoglobulin-like beta-sandwich Nicotinic receptor ligand binding domain-like Nicotinic receptor ligand binding domain-like
e4bogB3 B:216-312,B:403-469 Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore
e4bogC5 C:1-224 Immunoglobulin-like beta-sandwich Nicotinic receptor ligand binding domain-like Nicotinic receptor ligand binding domain-like
e4bogC6 C:224-320,C:421-485 Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore
e4bogD2 D:1-209 Immunoglobulin-like beta-sandwich Nicotinic receptor ligand binding domain-like Nicotinic receptor ligand binding domain-like
e4bogD1 D:210-306,D:374-437 Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore
e4bogE4 E:1-216 Immunoglobulin-like beta-sandwich Nicotinic receptor ligand binding domain-like Nicotinic receptor ligand binding domain-like
e4bogE3 E:217-314,E:414-477 Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore
e4bogF2 F:1-209 Immunoglobulin-like beta-sandwich Nicotinic receptor ligand binding domain-like Nicotinic receptor ligand binding domain-like
e4bogF1 F:210-306,F:374-437 Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore
e4bogG4 G:1-215 Immunoglobulin-like beta-sandwich Nicotinic receptor ligand binding domain-like Nicotinic receptor ligand binding domain-like
e4bogG3 G:216-312,G:403-469 Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore
e4bogH5 H:1-224 Immunoglobulin-like beta-sandwich Nicotinic receptor ligand binding domain-like Nicotinic receptor ligand binding domain-like
e4bogH6 H:224-320,H:421-485 Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore
e4bogI2 I:1-209 Immunoglobulin-like beta-sandwich Nicotinic receptor ligand binding domain-like Nicotinic receptor ligand binding domain-like
e4bogI1 I:210-306,I:374-437 Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore
e4bogJ4 J:1-216 Immunoglobulin-like beta-sandwich Nicotinic receptor ligand binding domain-like Nicotinic receptor ligand binding domain-like
e4bogJ3 J:217-314,J:414-477 Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore
e4bogK2 K:1-209 Immunoglobulin-like beta-sandwich Nicotinic receptor ligand binding domain-like Nicotinic receptor ligand binding domain-like
e4bogK1 K:210-306,K:374-437 Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore
e4bogL4 L:1-215 Immunoglobulin-like beta-sandwich Nicotinic receptor ligand binding domain-like Nicotinic receptor ligand binding domain-like
e4bogL3 L:216-312,L:403-469 Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore
e4bogM5 M:1-224 Immunoglobulin-like beta-sandwich Nicotinic receptor ligand binding domain-like Nicotinic receptor ligand binding domain-like
e4bogM6 M:224-320,M:421-485 Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore
e4bogN2 N:1-209 Immunoglobulin-like beta-sandwich Nicotinic receptor ligand binding domain-like Nicotinic receptor ligand binding domain-like
e4bogN1 N:210-306,N:374-437 Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore
e4bogO4 O:1-216 Immunoglobulin-like beta-sandwich Nicotinic receptor ligand binding domain-like Nicotinic receptor ligand binding domain-like
e4bogO3 O:217-314,O:414-477 Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore
e4bogP2 P:1-209 Immunoglobulin-like beta-sandwich Nicotinic receptor ligand binding domain-like Nicotinic receptor ligand binding domain-like
e4bogP1 P:210-306,P:374-437 Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore
e4bogQ4 Q:1-215 Immunoglobulin-like beta-sandwich Nicotinic receptor ligand binding domain-like Nicotinic receptor ligand binding domain-like
e4bogQ3 Q:216-312,Q:403-469 Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore
e4bogR5 R:1-224 Immunoglobulin-like beta-sandwich Nicotinic receptor ligand binding domain-like Nicotinic receptor ligand binding domain-like
e4bogR6 R:224-320,R:421-485 Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore
e4bogS2 S:1-209 Immunoglobulin-like beta-sandwich Nicotinic receptor ligand binding domain-like Nicotinic receptor ligand binding domain-like
e4bogS1 S:210-306,S:374-437 Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore
e4bogT4 T:1-216 Immunoglobulin-like beta-sandwich Nicotinic receptor ligand binding domain-like Nicotinic receptor ligand binding domain-like
e4bogT3 T:217-314,T:414-477 Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore
e4bogU2 U:1-209 Immunoglobulin-like beta-sandwich Nicotinic receptor ligand binding domain-like Nicotinic receptor ligand binding domain-like
e4bogU1 U:210-306,U:374-437 Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore
e4bogV4 V:1-215 Immunoglobulin-like beta-sandwich Nicotinic receptor ligand binding domain-like Nicotinic receptor ligand binding domain-like
e4bogV3 V:216-312,V:403-469 Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore
e4bogW5 W:1-224 Immunoglobulin-like beta-sandwich Nicotinic receptor ligand binding domain-like Nicotinic receptor ligand binding domain-like
e4bogW6 W:224-320,W:421-485 Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore
e4bogX2 X:1-209 Immunoglobulin-like beta-sandwich Nicotinic receptor ligand binding domain-like Nicotinic receptor ligand binding domain-like
e4bogX1 X:210-306,X:374-437 Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore
e4bogY4 Y:1-216 Immunoglobulin-like beta-sandwich Nicotinic receptor ligand binding domain-like Nicotinic receptor ligand binding domain-like
e4bogY3 Y:217-314,Y:414-477 Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore
e4bogZ2 Z:1-209 Immunoglobulin-like beta-sandwich Nicotinic receptor ligand binding domain-like Nicotinic receptor ligand binding domain-like
e4bogZ1 Z:210-306,Z:374-437 Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore

Structural contacts of domain e4bogW5 of H-group "Nicotinic receptor ligand binding domain-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4bogT4 W:X-1,Y,Z->T:x,y,z Nicotinic receptor ligand binding domain-like Interaction Interface Pymol
e4bogT3 W:X-1,Y,Z->T:x,y,z Neurotransmitter-gated ion-channel transmembrane pore Interaction Interface Pymol
e4bogS2 W:X-1,Y,Z->S:x,y,z Nicotinic receptor ligand binding domain-like Interaction Interface Pymol
e4bogS1 W:X-1,Y,Z->S:x,y,z Neurotransmitter-gated ion-channel transmembrane pore Interaction Interface Pymol
e4bogV4 W:x,y,z->V:X,Y,Z Nicotinic receptor ligand binding domain-like Interaction Interface Pymol
e4bogO4 W:X-1,Y-1,Z->O:x,y,z Nicotinic receptor ligand binding domain-like Interaction Interface Pymol
e4bogO3 W:X-1,Y-1,Z->O:x,y,z Neurotransmitter-gated ion-channel transmembrane pore Interaction Interface Pymol
e4bogX2 W:X,Y,Z->X:x,y,z Nicotinic receptor ligand binding domain-like Interaction Interface Pymol
e4bogR5 W:X-1,Y,Z->R:x,y,z Nicotinic receptor ligand binding domain-like Interaction Interface Pymol
e4bogK2 W:X-1,Y-1,Z->K:x,y,z Nicotinic receptor ligand binding domain-like Interaction Interface Pymol