ECOD: domain e4bpuB1

Domain ID e4bpuB1

A: alpha complex topology
X: PriB N-terminal domain-like
H: PriB N-terminal domain-like
T: PriB N-terminal domain-like
F: DNA_primase_lrg

UID:	001108333
Type:	Automatic domain
Parent:	e1zt2B1
Range:	B:10-253
PDB:	4bpu
PDB Description:	DNA PRIMASE LARGE SUBUNIT
UniProt:	P49643
Hsap BLAST neighbor:	P49643
Species:	Homo sapiens

Domains in the same chain:

Download Pymol

e4bpuB1	B:10-253	PriB N-terminal domain-like	PriB N-terminal domain-like	PriB N-terminal domain-like

Domains in the same PDB:

Structural contacts of domain e4bpuB1 of H-group "PriB N-terminal domain-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e4bpuA1	B:x,y,z->A:X,Y,Z	Prim-pol domain	Interaction Interface Pymol
e4bpuA2	B:x,y,z->A:X,Y,Z	Insert all-alpha domain in prim-pol	Interaction Interface Pymol
e4bpuC1	B:x,y,z->C:X,Y,Z	Prim-pol domain	Interaction Interface Pymol
e4bpuD1	B:x,y,z->D:X,Y-1,Z	PriB N-terminal domain-like	Interaction Interface Pymol
e4bpuC1	B:x,y,z->C:-X,Y-1/2,-Z	Prim-pol domain	Interaction Interface Pymol
e4bpuD1	B:X,Y,Z->D:x,y,z	PriB N-terminal domain-like	Interaction Interface Pymol
e4bpuB1	B:x,y,z->B:-X,Y-1/2,-Z	PriB N-terminal domain-like	Interaction Interface Pymol
e4bpuB1	B:-X,Y-1/2,-Z->B:x,y,z	PriB N-terminal domain-like	Interaction Interface Pymol
e4bpuA1	B:x,y,z->A:-X,Y-1/2,-Z	Prim-pol domain	Interaction Interface Pymol

e4bpuA1	A:4-192,A:305-408	Prim-pol domain	Prim-pol domain	Prim-pol domain
e4bpuA2	A:192-304	Insert all-alpha domain in prim-pol	Insert all-alpha domain in prim-pol	Insert all-alpha domain in prim-pol
e4bpuB1	B:10-253	PriB N-terminal domain-like	PriB N-terminal domain-like	PriB N-terminal domain-like
e4bpuC1	C:4-192,C:305-357,C:386-408	Prim-pol domain	Prim-pol domain	Prim-pol domain
e4bpuC2	C:192-304	Insert all-alpha domain in prim-pol	Insert all-alpha domain in prim-pol	Insert all-alpha domain in prim-pol
e4bpuD1	D:26-252	PriB N-terminal domain-like	PriB N-terminal domain-like	PriB N-terminal domain-like