Domain ID e4bu2A1

Download files:
  • A: beta sandwiches
  • X: jelly-roll
  • H: Double-stranded beta-helix
  • T: Double-stranded beta-helix
  • F: JmjC_2
UID: 001291204
Type: Automatic domain
Parent: e1vrbA1
Range: A:30-104,A:133-338
Ligands: AKG EDO NI
PDB: 4bu2
PDB Description: BIFUNCTIONAL LYSINE-SPECIFIC DEMETHYLASE AND HISTIDYL-HYDROXYLASE MINA
UniProt: Q8IUF8
Hsap BLAST neighbor: Q8IUF8
Species: Homo sapiens

Structure of domain e4bu2A1

Domains in the same chain:

e4bu2A1 A:30-104,A:133-338 jelly-roll Double-stranded beta-helix Double-stranded beta-helix
e4bu2A2 A:339-465 HTH HTH winged

Domains in the same PDB:

e4bu2A1 A:30-104,A:133-338 jelly-roll Double-stranded beta-helix Double-stranded beta-helix
e4bu2A2 A:339-465 HTH HTH winged

Structural contacts of domain e4bu2A1 of H-group "Double-stranded beta-helix":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4bu2A2 A:x,y,z->A:-Y+1/4,-X+1/4,-Z+1/4 HTH Interaction Interface Pymol
e4bu2A1 A:x,y,z->A:-Y+1/4,-X+1/4,-Z+1/4 Double-stranded beta-helix Interaction Interface Pymol
e4bu2A2 A:-Y+1/4,-X+1/4,-Z+1/4->A:x,y,z HTH Interaction Interface Pymol
e4bu2A1 A:-Y+1/4,-X+1/4,-Z+1/4->A:x,y,z Double-stranded beta-helix Interaction Interface Pymol
e4bu2A2 A:x,y,z->A:Z,X,Y HTH Interaction Interface Pymol
e4bu2A1 A:x,y,z->A:Y+1/4,X-1/4,-Z-1/4 Double-stranded beta-helix Interaction Interface Pymol
e4bu2A1 A:Y+1/4,X-1/4,-Z-1/4->A:x,y,z Double-stranded beta-helix Interaction Interface Pymol
e4bu2A2 A:X-1/4,-Z-1/4,Y+1/4->A:x,y,z HTH Interaction Interface Pymol