Domain ID e4bujD1

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  • A: beta duplicates or obligate multimers
  • X: beta-propeller-like
  • H: beta-propeller
  • T: 7-bladed
  • F: WD40
UID: 001095154
Type: Automatic domain
Parent: e1nexB1
Range: D:3-397
Ligands: SO4
PDB: 4buj
PDB Description: ANTIVIRAL PROTEIN SKI8
UniProt: Q02793
Species:

Structure of domain e4bujD1

Domains in the same chain:

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e4bujD1 D:3-397 beta-propeller-like beta-propeller 7-bladed

Domains in the same PDB:

e4bujA5 A:8-300 Antiviral helicase Ski2 N-terminal extended region Antiviral helicase Ski2 N-terminal extended region Antiviral helicase Ski2 N-terminal extended region
e4bujA1 A:301-504 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4bujA2 A:505-798 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4bujA3 A:799-1121 HTH HTH winged
e4bujA4 A:1122-1287 Sec63 N-terminal subdomain-like Sec63 N-terminal subdomain-like Sec63 N-terminal subdomain-like
e4bujB1 B:-1-338,B:399-1432 Repetitive alpha hairpins ARM repeat ARM repeat
e4bujC1 C:2-397 beta-propeller-like beta-propeller 7-bladed
e4bujD1 D:3-397 beta-propeller-like beta-propeller 7-bladed
e4bujE5 E:9-208 Antiviral helicase Ski2 N-terminal extended region Antiviral helicase Ski2 N-terminal extended region Antiviral helicase Ski2 N-terminal extended region
e4bujE7 E:301-505 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4bujE6 E:506-541,E:608-800 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4bujE4 E:799-1121 HTH HTH winged
e4bujE8 E:1122-1287 Sec63 N-terminal subdomain-like Sec63 N-terminal subdomain-like Sec63 N-terminal subdomain-like
e4bujF1 F:1-338,F:399-1432 Repetitive alpha hairpins ARM repeat ARM repeat
e4bujG1 G:2-397 beta-propeller-like beta-propeller 7-bladed
e4bujH2 H:3-332,H:354-394 beta-propeller-like beta-propeller 7-bladed

Structural contacts of domain e4bujD1 of H-group "beta-propeller":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4bujB1 D:x,y,z->B:X,Y,Z ARM repeat Interaction Interface Pymol
e4bujA4 D:x,y,z->A:X,Y,Z Sec63 N-terminal subdomain-like Interaction Interface Pymol
e4bujA1 D:-X-1,Y-1/2,-Z+1/2->A:x,y,z P-loop domains-related Interaction Interface Pymol
e4bujB1 D:-X-1,Y-1/2,-Z+1/2->B:x,y,z ARM repeat Interaction Interface Pymol
e4bujC1 D:x,y,z->C:X,Y,Z beta-propeller Interaction Interface Pymol