ECOD: domain e4bvuB1

Domain ID e4bvuB1

A: a+b two layers
X: UBC-like
H: UBC-like
T: UBC-like
F: UQ_con

UID:	001140732
Type:	Automatic domain
Parent:	e1jatB1
Range:	B:2-147
PDB:	4bvu
PDB Description:	UBIQUITIN-CONJUGATING ENZYME E2 D3
UniProt:	P61077
Hsap BLAST neighbor:	P61077
Species:	Homo sapiens

Domains in the same chain:

Download Pymol

e4bvuB1	B:2-147	UBC-like	UBC-like	UBC-like

Domains in the same PDB:

e4bvuA1	A:26-196	Protein kinase/SAICAR synthase/ATP-grasp	Protein kinase/SAICAR synthase/ATP-grasp	Protein kinase
e4bvuB1	B:2-147	UBC-like	UBC-like	UBC-like
e4bvuC1	C:201-276	beta-Grasp	Ubiquitin-related	Ubiquitin-like

Structural contacts of domain e4bvuB1 of H-group "UBC-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e4bvuA1	B:x,y,z->A:X,Y,Z	Protein kinase/SAICAR synthase/ATP-grasp	Interaction Interface Pymol
e4bvuB1	B:x,y,z->B:-X+Y-1,Y,-Z+1/2	UBC-like	Interaction Interface Pymol
e4bvuB1	B:-X+Y-1,Y,-Z+1/2->B:x,y,z	UBC-like	Interaction Interface Pymol
e4bvuA1	B:x,y,z->A:-Y,-X,-Z+1/2	Protein kinase/SAICAR synthase/ATP-grasp	Interaction Interface Pymol
e4bvuA1	B:X,Y,Z-1->A:x,y,z	Protein kinase/SAICAR synthase/ATP-grasp	Interaction Interface Pymol
e4bvuC1	B:X,Y,Z->C:x,y,z	Ubiquitin-related	Interaction Interface Pymol
e4bvuA1	B:x,y,z->A:-X+Y-1,Y,-Z+1/2	Protein kinase/SAICAR synthase/ATP-grasp	Interaction Interface Pymol
e4bvuC1	B:-Y,-X,-Z+1/2->C:x,y,z	Ubiquitin-related	Interaction Interface Pymol