ECOD: domain e4bwjA1

Domain ID e4bwjA1

A: alpha arrays
X: helical bundle in Bacillus stearothermophilus-like DNA polymerase I
H: helical bundle in Bacillus stearothermophilus-like DNA polymerase I
T: helical bundle in Bacillus stearothermophilus-like DNA polymerase I
F: DNA_pol_A

UID:	001098502
Type:	Automatic domain
Parent:	e2hhvA1
Range:	A:616-739
Ligands:	DCT
PDB:	4bwj
PDB Description:	DNA POLYMERASE I, THERMOSTABLE
UniProt:	P19821
Hsap BLAST neighbor:	O75417
Species:	Thermus aquaticus

Domain
In chain context
In PDB context

Structure of domain e4bwjA1

Domains in the same chain:

Download Pymol

e4bwjA4	A:294-422	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e4bwjA2	A:423-591	"fingers" domain in bacteriophage RB69-like DNA polymerase I	"fingers" domain in bacteriophage RB69-like DNA polymerase I	"fingers" domain in bacteriophage RB69-like DNA polymerase I
e4bwjA3	A:592-615,A:740-832	Alpha-beta plaits	Adenylyl and guanylyl cyclase catalytic domain-like	Adenylyl and guanylyl cyclase catalytic domain-like
e4bwjA1	A:616-739	helical bundle in Bacillus stearothermophilus-like DNA polymerase I	helical bundle in Bacillus stearothermophilus-like DNA polymerase I	helical bundle in Bacillus stearothermophilus-like DNA polymerase I

Domains in the same PDB:

e4bwjA4	A:294-422	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e4bwjA2	A:423-591	"fingers" domain in bacteriophage RB69-like DNA polymerase I	"fingers" domain in bacteriophage RB69-like DNA polymerase I	"fingers" domain in bacteriophage RB69-like DNA polymerase I
e4bwjA3	A:592-615,A:740-832	Alpha-beta plaits	Adenylyl and guanylyl cyclase catalytic domain-like	Adenylyl and guanylyl cyclase catalytic domain-like
e4bwjA1	A:616-739	helical bundle in Bacillus stearothermophilus-like DNA polymerase I	helical bundle in Bacillus stearothermophilus-like DNA polymerase I	helical bundle in Bacillus stearothermophilus-like DNA polymerase I

Structural contacts of domain e4bwjA1 of H-group "helical bundle in Bacillus stearothermophilus-like DNA polymerase I":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e4bwjA1	A:x,y,z->A:-X,-X+Y,-Z+1/3	helical bundle in Bacillus stearothermophilus-like DNA polymerase I	Interaction Interface Pymol
e4bwjA2	A:x,y,z->A:-X,-X+Y,-Z+1/3	"fingers" domain in bacteriophage RB69-like DNA polymerase I	Interaction Interface Pymol
e4bwjA3	A:x,y,z->A:-X,-X+Y,-Z+1/3	Adenylyl and guanylyl cyclase catalytic domain-like	Interaction Interface Pymol
e4bwjA3	A:-X,-X+Y,-Z+1/3->A:x,y,z	Adenylyl and guanylyl cyclase catalytic domain-like	Interaction Interface Pymol
e4bwjA2	A:-X,-X+Y,-Z+1/3->A:x,y,z	"fingers" domain in bacteriophage RB69-like DNA polymerase I	Interaction Interface Pymol
e4bwjA1	A:-X,-X+Y,-Z+1/3->A:x,y,z	helical bundle in Bacillus stearothermophilus-like DNA polymerase I	Interaction Interface Pymol
e4bwjA1	A:x,y,z->A:X-Y,-Y,-Z-1/3	helical bundle in Bacillus stearothermophilus-like DNA polymerase I	Interaction Interface Pymol
e4bwjA1	A:X-Y,-Y,-Z-1/3->A:x,y,z	helical bundle in Bacillus stearothermophilus-like DNA polymerase I	Interaction Interface Pymol
e4bwjA3	A:x,y,z->A:-X,-X+Y,-Z-2/3	Adenylyl and guanylyl cyclase catalytic domain-like	Interaction Interface Pymol
e4bwjA3	A:-X,-X+Y,-Z-2/3->A:x,y,z	Adenylyl and guanylyl cyclase catalytic domain-like	Interaction Interface Pymol
e4bwjA4	A:x,y,z->A:X-Y-1,-Y-1,-Z-1/3	Ribonuclease H-like	Interaction Interface Pymol
e4bwjA2	A:-Y,X-Y,Z+1/3->A:x,y,z	"fingers" domain in bacteriophage RB69-like DNA polymerase I	Interaction Interface Pymol