ECOD: domain e4c0oD1

Domain ID e4c0oD1

A: a+b two layers
X: Alpha-beta plaits
H: RNA-binding domain, RBD
T: RNA-binding domain, RBD
F: RRM_1

UID:	001142079
Type:	Automatic domain
Parent:	e2b0gA1
Range:	D:117-211
PDB:	4c0o
PDB Description:	SERINE/ARGININE-RICH SPLICING FACTOR 1
UniProt:	Q07955
Hsap BLAST neighbor:	Q07955
Species:	Homo sapiens

Domain
In chain context
In PDB context

Structure of domain e4c0oD1

Domains in the same chain:

Download Pymol

e4c0oD1	D:117-211	Alpha-beta plaits	RNA-binding domain, RBD	RNA-binding domain, RBD

Domains in the same PDB:

e4c0oA1	A:3-922	Repetitive alpha hairpins	ARM repeat	ARM repeat
e4c0oB1	B:3-922	Repetitive alpha hairpins	ARM repeat	ARM repeat
e4c0oC1	C:116-211	Alpha-beta plaits	RNA-binding domain, RBD	RNA-binding domain, RBD
e4c0oD1	D:117-211	Alpha-beta plaits	RNA-binding domain, RBD	RNA-binding domain, RBD

Structural contacts of domain e4c0oD1 of H-group "RNA-binding domain, RBD":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e4c0oB1	D:x,y,z->B:X,Y,Z	ARM repeat	Interaction Interface Pymol
e4c0oA1	D:x,y,z->A:X,Y,Z	ARM repeat	Interaction Interface Pymol