Domain ID e4c0vV1

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  • A: a+b three layers
  • X: Cytidine deaminase-like
  • H: Cytidine deaminase-like
  • T: Cytidine deaminase-like
  • F: JAB
UID: 001095321
Type: Automatic domain
Parent: e3j7jF1
Range: V:17-219
PDB: 4c0v
PDB Description:
Hsap BLAST neighbor: O00487
Species:

Structure of domain e4c0vV1

Domains in the same chain:

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e4c0vV1 V:17-219 Cytidine deaminase-like Cytidine deaminase-like Cytidine deaminase-like

Domains in the same PDB:

e4c0v11 1:-9-196 Ntn/PP2C Ntn Proteasome subunits
e4c0v21 2:1-224 Ntn/PP2C Ntn Proteasome subunits
e4c0v31 3:-8-196 Ntn/PP2C Ntn Proteasome subunits
e4c0v41 4:-1-197 Ntn/PP2C Ntn Proteasome subunits
e4c0v51 5:1-212 Ntn/PP2C Ntn Proteasome subunits
e4c0v61 6:-9-213 Ntn/PP2C Ntn Proteasome subunits
e4c0v71 7:-8-225 Ntn/PP2C Ntn Proteasome subunits
e4c0vA1 A:10-252 Ntn/PP2C Ntn Proteasome subunits
e4c0vB1 B:1-250 Ntn/PP2C Ntn Proteasome subunits
e4c0vC1 C:2-247 Ntn/PP2C Ntn Proteasome subunits
e4c0vD1 D:3-245 Ntn/PP2C Ntn Proteasome subunits
e4c0vE1 E:9-252 Ntn/PP2C Ntn Proteasome subunits
e4c0vF1 F:2-234 Ntn/PP2C Ntn Proteasome subunits
e4c0vG1 G:4-249 Ntn/PP2C Ntn Proteasome subunits
e4c0vH1 H:191-377 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4c0vH3 H:378-456 Histone-like Histone-related AAA+ ATPase lid domain
e4c0vI1 I:75-163 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4c0vI3 I:164-351 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4c0vI2 I:352-437 Histone-like Histone-related AAA+ ATPase lid domain
e4c0vN2 N:4-307 Repetitive alpha hairpins 26S proteasome subunit Rpn2 N-terminal domain 26S proteasome subunit Rpn2 N-terminal domain
e4c0vN3 N:307-754 Repetitive alpha hairpins Proteasome/cyclosome (PC) repeat Proteasome/cyclosome (PC) repeat
e4c0vN4 N:755-787,N:860-926 26S proteasome subunit Rpn2 C-terminal domain 26S proteasome subunit Rpn2 C-terminal domain 26S proteasome subunit Rpn2 C-terminal domain
e4c0vO2 O:1-278 Repetitive alpha hairpins ARM repeat ARM repeat
e4c0vO3 O:279-352 HTH HTH winged
e4c0vP2 P:28-337 Repetitive alpha hairpins ARM repeat ARM repeat
e4c0vP1 P:338-404 HTH HTH winged
e4c0vQ1 Q:1-325 Repetitive alpha hairpins ARM repeat ARM repeat
e4c0vQ2 Q:326-402 HTH HTH winged
e4c0vR2 R:42-319 Repetitive alpha hairpins ARM repeat ARM repeat
e4c0vR3 R:320-394 HTH HTH winged
e4c0vS2 S:203-369 Repetitive alpha hairpins ARM repeat ARM repeat
e4c0vS4 S:370-453 HTH HTH winged
e4c0vV1 V:17-219 Cytidine deaminase-like Cytidine deaminase-like Cytidine deaminase-like
e4c0vW1 W:1-198 HAD domain-like HAD domain-related vWA-like
e4c0vX1 X:7-134 PH domain-like PH domain-like PH domain-like

Structural contacts of domain e4c0vV1 of H-group "Cytidine deaminase-like":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4c0vN3 V:X,Y,Z->N:x,y,z Proteasome/cyclosome (PC) repeat Interaction Interface Pymol
e4c0vN3 V:X,Y,Z->H:x,y,z Proteasome/cyclosome (PC) repeat Interaction Interface Pymol