ECOD: domain e4c13A3

Domain ID e4c13A3

A: a/b three-layered sandwiches
X: MurF and HprK N-domain-like
H: MurF and HprK N-domain-like
T: MurF and HprK N-domain-like
F: Mur_ligase

UID:	001108472
Type:	Automatic domain
Parent:	e1e8cA3
Range:	A:1-97
Ligands:	UML
PDB:	4c13
PDB Description:	UDP-N-ACETYLMURAMOYL-L-ALANYL-D-GLUTAMATE--L-LYSINE LIGASE
UniProt:	Q2FZP6
Species:	Staphylococcus aureus

Domain
In chain context
In PDB context

Structure of domain e4c13A3

Domains in the same chain:

Download Pymol

e4c13A3	A:1-97	MurF and HprK N-domain-like	MurF and HprK N-domain-like	MurF and HprK N-domain-like
e4c13A4	A:98-331	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e4c13A5	A:332-490	MurD-like peptide ligases, peptide-binding domain	MurD-like peptide ligases, peptide-binding domain	MurD-like peptide ligases, peptide-binding domain

Domains in the same PDB:

e4c13A3	A:1-97	MurF and HprK N-domain-like	MurF and HprK N-domain-like	MurF and HprK N-domain-like
e4c13A4	A:98-331	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e4c13A5	A:332-490	MurD-like peptide ligases, peptide-binding domain	MurD-like peptide ligases, peptide-binding domain	MurD-like peptide ligases, peptide-binding domain

Structural contacts of domain e4c13A3 of H-group "MurF and HprK N-domain-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e4c13A4	A:x,y,z->A:-X,Y,-Z	P-loop domains-related	Interaction Interface Pymol
e4c13A4	A:-X,Y,-Z->A:x,y,z	P-loop domains-related	Interaction Interface Pymol
e4c13A5	A:x,y,z->A:-X-1/2,Y-1/2,-Z	MurD-like peptide ligases, peptide-binding domain	Interaction Interface Pymol
e4c13A4	A:X,Y,Z-1->A:x,y,z	P-loop domains-related	Interaction Interface Pymol