Domain ID e4c56J2

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  • A: a+b two layers
  • X: MHC antigen-recognition domain
  • H: MHC antigen-recognition domain
  • T: MHC antigen-recognition domain
  • F: MHC_II_alpha
UID: 001316071
Type: Automatic domain
Parent: e1hdmA2
Range: J:3-81
PDB: 4c56
PDB Description: HLA CLASS II HISTOCOMPATIBILITY ANTIGEN, DR ALPHA CHAIN
UniProt: P01903
Hsap BLAST neighbor: P01903
Species: Homo sapiens

Structure of domain e4c56J2

Domains in the same chain:

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e4c56J2 J:3-81 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e4c56J1 J:82-180 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Domains in the same PDB:

e4c56A1 A:3-113 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4c56A2 A:114-203 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4c56B1 B:4-118 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4c56B2 B:119-243 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4c56C2 C:2-121 OB-fold Bacterial enterotoxins Bacterial enterotoxins
e4c56C1 C:122-236 beta-Grasp Ubiquitin-related Ubiquitin-like
e4c56D2 D:4-81 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e4c56D1 D:82-181 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4c56E2 E:2-87 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e4c56E1 E:94-190 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4c56G1 G:3-113 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4c56G2 G:114-202 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4c56H1 H:5-118 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4c56H2 H:119-243 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4c56I1 I:2-121 OB-fold Bacterial enterotoxins Bacterial enterotoxins
e4c56I2 I:122-237 beta-Grasp Ubiquitin-related Ubiquitin-like
e4c56J2 J:3-81 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e4c56J1 J:82-180 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4c56K2 K:2-87 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e4c56K1 K:94-190 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Structural contacts of domain e4c56J2 of H-group "MHC antigen-recognition domain":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4c56K1 J:X,Y,Z->K:x,y,z Immunoglobulin-related Interaction Interface Pymol
e4c56K1 J:X,Y,Z->K:x,y,z Immunoglobulin-related Interaction Interface Pymol
e4c56K1 J:x,y,z->I:X,Y,Z Immunoglobulin-related Interaction Interface Pymol
e4c56K1 J:x,y,z->I:X,Y,Z Immunoglobulin-related Interaction Interface Pymol