ECOD: domain e4c8rB1

Domain ID e4c8rB1

A: beta sandwiches
X: jelly-roll
H: Double-stranded beta-helix
T: Double-stranded beta-helix
F: TauD

UID:	001291218
Type:	Automatic domain
Parent:	e1y0zA1
Range:	B:105-384
Ligands:	6YT EDO NI
PDB:	4c8r
PDB Description:	GAMMA-BUTYROBETAINE DIOXYGENASE
UniProt:	O75936
Hsap BLAST neighbor:	O75936
Species:	Homo sapiens

Domains in the same chain:

Download Pymol

e4c8rB2	B:1-104	XRCC4, N-terminal domain-like	NE0471 N-terminal domain-like	NE0471 N-terminal domain-like
e4c8rB1	B:105-384	jelly-roll	Double-stranded beta-helix	Double-stranded beta-helix

Domains in the same PDB:

e4c8rA2	A:1-104	XRCC4, N-terminal domain-like	NE0471 N-terminal domain-like	NE0471 N-terminal domain-like
e4c8rA1	A:105-384	jelly-roll	Double-stranded beta-helix	Double-stranded beta-helix
e4c8rB2	B:1-104	XRCC4, N-terminal domain-like	NE0471 N-terminal domain-like	NE0471 N-terminal domain-like
e4c8rB1	B:105-384	jelly-roll	Double-stranded beta-helix	Double-stranded beta-helix
e4c8rC2	C:1-104	XRCC4, N-terminal domain-like	NE0471 N-terminal domain-like	NE0471 N-terminal domain-like
e4c8rC1	C:105-384	jelly-roll	Double-stranded beta-helix	Double-stranded beta-helix
e4c8rD2	D:1-104	XRCC4, N-terminal domain-like	NE0471 N-terminal domain-like	NE0471 N-terminal domain-like
e4c8rD1	D:105-384	jelly-roll	Double-stranded beta-helix	Double-stranded beta-helix
e4c8rE2	E:1-104	XRCC4, N-terminal domain-like	NE0471 N-terminal domain-like	NE0471 N-terminal domain-like
e4c8rE1	E:105-384	jelly-roll	Double-stranded beta-helix	Double-stranded beta-helix
e4c8rF2	F:1-104	XRCC4, N-terminal domain-like	NE0471 N-terminal domain-like	NE0471 N-terminal domain-like
e4c8rF1	F:105-384	jelly-roll	Double-stranded beta-helix	Double-stranded beta-helix

Structural contacts of domain e4c8rB1 of H-group "Double-stranded beta-helix":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e4c8rA2	B:x,y,z->A:X,Y,Z	NE0471 N-terminal domain-like	Interaction Interface Pymol
e4c8rA1	B:x,y,z->A:X,Y,Z	Double-stranded beta-helix	Interaction Interface Pymol
e4c8rC1	B:x,y,z->C:-X-1/2,-Y,Z-1/2	Double-stranded beta-helix	Interaction Interface Pymol
e4c8rD1	B:x,y,z->D:X-1/2,-Y+1/2,-Z	Double-stranded beta-helix	Interaction Interface Pymol
e4c8rD2	B:x,y,z->D:-X-1/2,-Y,Z-1/2	NE0471 N-terminal domain-like	Interaction Interface Pymol
e4c8rC1	B:x,y,z->C:-X-1/2,-Y+1,Z-1/2	Double-stranded beta-helix	Interaction Interface Pymol
e4c8rE1	B:X,Y,Z->E:x,y,z	Double-stranded beta-helix	Interaction Interface Pymol
e4c8rE2	B:X,Y,Z->E:x,y,z	NE0471 N-terminal domain-like	Interaction Interface Pymol