Domain ID e4cclB1

Download files:
  • A: beta sandwiches
  • X: jelly-roll
  • H: Double-stranded beta-helix
  • T: Double-stranded beta-helix
  • F: JmjC_2
UID: 001288606
Type: Automatic domain
Parent: e1vrbA1
Range: B:1-266
Ligands: MN SO4
PDB: 4ccl
PDB Description: 50S RIBOSOMAL PROTEIN L16 ARGININE HYDROXYLASE
UniProt: P27431
Hsap BLAST neighbor: Q9H6W3
Species: Escherichia coli

Structure of domain e4cclB1

Structural contacts of domain e4cclB1 of H-group "Double-stranded beta-helix":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4cclA1 B:x,y,z->A:X,Y,Z Double-stranded beta-helix Interaction Interface Pymol
e4cclA2 B:x,y,z->A:X,Y,Z HTH Interaction Interface Pymol
e4cclA1 B:-Y,-X+1,-Z+1/2->A:x,y,z Double-stranded beta-helix Interaction Interface Pymol
e4cclA1 B:-Y+1/2,X-1/2,Z-1/4->A:x,y,z Double-stranded beta-helix Interaction Interface Pymol
e4cclB1 B:x,y,z->B:-Y+1/2,X-1/2,Z-1/4 Double-stranded beta-helix Interaction Interface Pymol
e4cclB1 B:-Y+1/2,X-1/2,Z-1/4->B:x,y,z Double-stranded beta-helix Interaction Interface Pymol
e4cclB2 B:-Y+1/2,X-1/2,Z-1/4->B:x,y,z HTH Interaction Interface Pymol
e4cclB1 B:x,y,z->B:Y+1,X-1,-Z+1 Double-stranded beta-helix Interaction Interface Pymol
e4cclB1 B:Y+1,X-1,-Z+1->B:x,y,z Double-stranded beta-helix Interaction Interface Pymol
e4cclA2 B:x,y,z->A:-Y+1/2,X-1/2,Z-1/4 HTH Interaction Interface Pymol
e4cclA1 B:x,y,z->A:-Y+1/2,X-1/2,Z-1/4 Double-stranded beta-helix Interaction Interface Pymol
e4cclA1 B:x,y,z->A:-X+3/2,Y-1/2,-Z+3/4 Double-stranded beta-helix Interaction Interface Pymol