ECOD: domain e4cdgB11

Domain ID e4cdgB11

A: a/b three-layered sandwiches
X: P-loop domains-like
H: P-loop domains-related
T: P-loop containing nucleoside triphosphate hydrolases
F: Helicase_C,RecQ_Zn_bind

UID:	001233359
Type:	Automatic domain
Parent:	e1oywA3
Range:	B:856-1071
Ligands:	ADP ZN
PDB:	4cdg
PDB Description:	BLOOM SYNDROME PROTEIN
UniProt:	P54132
Hsap BLAST neighbor:	P54132
Species:	Homo sapiens

Domain
In chain context
In PDB context

Structure of domain e4cdgB11

Domains in the same chain:

Download Pymol

e4cdgB12	B:641-855	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e4cdgB11	B:856-1071	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e4cdgB9	B:1072-1181	HTH	HTH	winged
e4cdgB10	B:1182-1290	HhH/H2TH	SAM/DNA-glycosylase	SAM domain-like

Domains in the same PDB:

e4cdgA12	A:639-855	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e4cdgA11	A:856-1071	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e4cdgA9	A:1072-1181	HTH	HTH	winged
e4cdgA10	A:1182-1290	HhH/H2TH	SAM/DNA-glycosylase	SAM domain-like
e4cdgB12	B:641-855	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e4cdgB11	B:856-1071	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e4cdgB9	B:1072-1181	HTH	HTH	winged
e4cdgB10	B:1182-1290	HhH/H2TH	SAM/DNA-glycosylase	SAM domain-like
e4cdgC1	C:23-144	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4cdgD1	D:23-144	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Structural contacts of domain e4cdgB11 of H-group "P-loop domains-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e4cdgD1	B:X,Y,Z->D:x,y,z	Immunoglobulin-related	Interaction Interface Pymol
e4cdgA9	B:X-1,Y+1,Z->A:x,y,z	HTH	Interaction Interface Pymol
e4cdgA10	B:X-1,Y+1,Z->A:x,y,z	SAM/DNA-glycosylase	Interaction Interface Pymol
e4cdgC1	B:X-1,Y+1,Z->C:x,y,z	Immunoglobulin-related	Interaction Interface Pymol