Domain ID e4ckkD1

Download files:
  • A: a+b two layers
  • X: a+b domain in type II DNA topoisomerase
  • H: a+b domain in type II DNA topoisomerase
  • T: a+b domain in type II DNA topoisomerase
  • F: DNA_topoisoIV
UID: 001544303
Type: Automatic domain
Parent: e4cklB2
Range: D:164-344
PDB: 4ckk
PDB Description: DNA GYRASE SUBUNIT A
UniProt: Q7AC45
Species: Escherichia coli

Structure of domain e4ckkD1

Domains in the same chain:

e4ckkD3 D:33-163 HTH HTH winged
e4ckkD1 D:164-344 a+b domain in type II DNA topoisomerase a+b domain in type II DNA topoisomerase a+b domain in type II DNA topoisomerase
e4ckkD4 D:338-522 alpha-helical domain in type II DNA topoisomerase alpha-helical domain in type II DNA topoisomerase alpha-helical domain in type II DNA topoisomerase

Domains in the same PDB:

e4ckkA2 A:33-163 HTH HTH winged
e4ckkA3 A:164-344 a+b domain in type II DNA topoisomerase a+b domain in type II DNA topoisomerase a+b domain in type II DNA topoisomerase
e4ckkA5 A:338-522 alpha-helical domain in type II DNA topoisomerase alpha-helical domain in type II DNA topoisomerase alpha-helical domain in type II DNA topoisomerase
e4ckkB1 B:33-163 HTH HTH winged
e4ckkB3 B:164-344 a+b domain in type II DNA topoisomerase a+b domain in type II DNA topoisomerase a+b domain in type II DNA topoisomerase
e4ckkB2 B:338-522 alpha-helical domain in type II DNA topoisomerase alpha-helical domain in type II DNA topoisomerase alpha-helical domain in type II DNA topoisomerase
e4ckkC3 C:33-163 HTH HTH winged
e4ckkC1 C:164-310 a+b domain in type II DNA topoisomerase a+b domain in type II DNA topoisomerase a+b domain in type II DNA topoisomerase
e4ckkC2 C:338-522 alpha-helical domain in type II DNA topoisomerase alpha-helical domain in type II DNA topoisomerase alpha-helical domain in type II DNA topoisomerase
e4ckkD3 D:33-163 HTH HTH winged
e4ckkD1 D:164-344 a+b domain in type II DNA topoisomerase a+b domain in type II DNA topoisomerase a+b domain in type II DNA topoisomerase
e4ckkD4 D:338-522 alpha-helical domain in type II DNA topoisomerase alpha-helical domain in type II DNA topoisomerase alpha-helical domain in type II DNA topoisomerase

Structural contacts of domain e4ckkD1 of H-group "a+b domain in type II DNA topoisomerase":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4ckkA3 D:x,y,z->A:X-1,Y-1,Z a+b domain in type II DNA topoisomerase Interaction Interface Pymol
e4ckkA2 D:x,y,z->A:X-1,Y-1,Z HTH Interaction Interface Pymol
e4ckkC1 D:x,y,z->C:X,Y-1,Z a+b domain in type II DNA topoisomerase Interaction Interface Pymol
e4ckkC2 D:x,y,z->C:X,Y-1,Z+1 alpha-helical domain in type II DNA topoisomerase Interaction Interface Pymol