ECOD: domain e4cknD1

Domain ID e4cknD1

A: alpha arrays
X: HTH
H: HTH
T: HTH motif inserted in other structures
F: Unmapped domains

UID:	001629696
Type:	Automatic domain
Parent:	e4ckpE2
Range:	D:196-225
PDB:	4ckn
PDB Description:	SAS-6
UniProt:	E9AFQ5
Species:	Leishmania major

Domain
In chain context
In PDB context

Structure of domain e4cknD1

Domains in the same chain:

Download Pymol

e4cknD2	D:131-195,D:226-270	XRCC4, N-terminal domain-like	XRCC4, N-terminal domain	XRCC4, N-terminal domain
e4cknD1	D:196-225	HTH	HTH	HTH motif inserted in other structures
e4cknD3	D:271-315	XRCC4 C-terminal oligomerization domain	XRCC4 C-terminal oligomerization domain	XRCC4 C-terminal oligomerization domain

Domains in the same PDB:

e4cknA2	A:131-195,A:226-279	XRCC4, N-terminal domain-like	XRCC4, N-terminal domain	XRCC4, N-terminal domain
e4cknA1	A:196-225	HTH	HTH	HTH motif inserted in other structures
e4cknA3	A:271-314	XRCC4 C-terminal oligomerization domain	XRCC4 C-terminal oligomerization domain	XRCC4 C-terminal oligomerization domain
e4cknB2	B:130-195,B:226-279	XRCC4, N-terminal domain-like	XRCC4, N-terminal domain	XRCC4, N-terminal domain
e4cknB1	B:196-225	HTH	HTH	HTH motif inserted in other structures
e4cknC2	C:130-195,C:226-270	XRCC4, N-terminal domain-like	XRCC4, N-terminal domain	XRCC4, N-terminal domain
e4cknC1	C:196-225	HTH	HTH	HTH motif inserted in other structures
e4cknC3	C:271-315	XRCC4 C-terminal oligomerization domain	XRCC4 C-terminal oligomerization domain	XRCC4 C-terminal oligomerization domain
e4cknD2	D:131-195,D:226-270	XRCC4, N-terminal domain-like	XRCC4, N-terminal domain	XRCC4, N-terminal domain
e4cknD1	D:196-225	HTH	HTH	HTH motif inserted in other structures
e4cknD3	D:271-315	XRCC4 C-terminal oligomerization domain	XRCC4 C-terminal oligomerization domain	XRCC4 C-terminal oligomerization domain

Structural contacts of domain e4cknD1 of H-group "HTH":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e4cknC1	D:x,y,z->C:-X-1/2,Y-1/2,-Z	HTH	Interaction Interface Pymol
e4cknC2	D:x,y,z->C:-X-1/2,Y-1/2,-Z	XRCC4, N-terminal domain	Interaction Interface Pymol
e4cknC3	D:x,y,z->C:-X-1/2,Y-1/2,-Z	XRCC4 C-terminal oligomerization domain	Interaction Interface Pymol
e4cknD3	D:x,y,z->D:-X-1/2,Y-1/2,-Z	XRCC4 C-terminal oligomerization domain	Interaction Interface Pymol
e4cknB1	D:x,y,z->B:-X,Y-1,-Z	HTH	Interaction Interface Pymol