Domain ID e4cndB1

Download files:
  • A: a/b three-layered sandwiches
  • X: alpha/beta knot
  • H: alpha/beta knot
  • T: alpha/beta knot
  • F: SpoU_methylase
UID: 001299393
Type: Automatic domain
Parent: e1mxiA1
Range: B:-5-164
Ligands: PEG
PDB: 4cnd
PDB Description: TRNA (CYTIDINE/URIDINE-2'-O-)-METHYLTRANSFERASE TRMJ
UniProt: P0AE01
Species:

Structure of domain e4cndB1

Structural contacts of domain e4cndB1 of H-group "alpha/beta knot":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4cndA1 B:x,y,z->A:X,Y,Z alpha/beta knot Interaction Interface Pymol
e4cndA1 B:-X+1,Y-1/2,-Z+2->A:x,y,z alpha/beta knot Interaction Interface Pymol
e4cndA1 B:-X+2,Y-1/2,-Z+2->A:x,y,z alpha/beta knot Interaction Interface Pymol
e4cndA1 B:X,Y,Z-1->A:x,y,z alpha/beta knot Interaction Interface Pymol
e4cndA1 B:X-1,Y,Z-1->A:x,y,z alpha/beta knot Interaction Interface Pymol
e4cndB1 B:x,y,z->B:-X+2,Y-1/2,-Z+2 alpha/beta knot Interaction Interface Pymol
e4cndB1 B:-X+2,Y-1/2,-Z+2->B:x,y,z alpha/beta knot Interaction Interface Pymol
e4cndB1 B:x,y,z->B:X-1,Y,Z alpha/beta knot Interaction Interface Pymol
e4cndB1 B:X-1,Y,Z->B:x,y,z alpha/beta knot Interaction Interface Pymol