Domain ID e4cocA1

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  • A: alpha bundles
  • X: Retrovirus capsid protein
  • H: Retrovirus capsid protein-C
  • T: Retrovirus capsid protein-C
  • F: Gag_p24_C
UID: 001294196
Type: Automatic domain
Parent: e1a8oA1
Range: A:148-223
Ligands: SO4
PDB: 4coc
PDB Description: CAPSID PROTEIN P24
UniProt: P12497
Hsap BLAST neighbor: P63145
Species: Human immunodeficiency virus 1

Structure of domain e4cocA1

Structural contacts of domain e4cocA1 of H-group "Retrovirus capsid protein-C":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4cocB1 A:X,Y,Z->B:x,y,z Retrovirus capsid protein-C Interaction Interface Pymol
e4cocA1 A:x,y,z->A:-X,Y,-Z Retrovirus capsid protein-C Interaction Interface Pymol
e4cocA1 A:-X,Y,-Z->A:x,y,z Retrovirus capsid protein-C Interaction Interface Pymol
e4cocB1 A:x,y,z->B:X-1/2,Y+1/2,Z Retrovirus capsid protein-C Interaction Interface Pymol
e4cocC1 A:x,y,z->C:X-1/2,Y-1/2,Z Retrovirus capsid protein-C Interaction Interface Pymol
e4cocB1 A:X,Y-1,Z->B:x,y,z Retrovirus capsid protein-C Interaction Interface Pymol
e4cocA1 A:x,y,z->A:X,Y-1,Z Retrovirus capsid protein-C Interaction Interface Pymol
e4cocA1 A:X,Y-1,Z->A:x,y,z Retrovirus capsid protein-C Interaction Interface Pymol
e4cocB1 A:-X+1/2,Y-1/2,-Z->B:x,y,z Retrovirus capsid protein-C Interaction Interface Pymol