Domain ID e4cr3O1

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  • A: alpha superhelices
  • X: Repetitive alpha hairpins
  • H: ARM repeat
  • T: ARM repeat
  • F: PSD13_N
UID: 001283943
Type: Automatic domain
Parent: e4c0vO2
Range: O:1-278
PDB: 4cr3
PDB Description: 26S PROTEASOME REGULATORY SUBUNIT RPN9
UniProt: Q04062
Hsap BLAST neighbor: Q9UNM6
Species: Saccharomyces cerevisiae

Structure of domain e4cr3O1

Domains in the same chain:

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e4cr3O1 O:1-278 Repetitive alpha hairpins ARM repeat ARM repeat
e4cr3O2 O:279-356 HTH HTH winged
e4cr3O3 O:357-387 26S proteasome regulatory subunits C-terminal helices 26S proteasome regulatory subunit RPN9 C-terminal helix 26S proteasome regulatory subunit RPN9 C-terminal helix

Domains in the same PDB:

e4cr311 1:-9-196 Ntn/PP2C Ntn Proteasome subunits
e4cr321 2:1-223 Ntn/PP2C Ntn Proteasome subunits
e4cr331 3:-8-196 Ntn/PP2C Ntn Proteasome subunits
e4cr341 4:-1-197 Ntn/PP2C Ntn Proteasome subunits
e4cr351 5:1-212 Ntn/PP2C Ntn Proteasome subunits
e4cr361 6:-9-213 Ntn/PP2C Ntn Proteasome subunits
e4cr371 7:-8-225 Ntn/PP2C Ntn Proteasome subunits
e4cr3A1 A:10-252 Ntn/PP2C Ntn Proteasome subunits
e4cr3B1 B:1-250 Ntn/PP2C Ntn Proteasome subunits
e4cr3C1 C:2-246 Ntn/PP2C Ntn Proteasome subunits
e4cr3D1 D:3-244 Ntn/PP2C Ntn Proteasome subunits
e4cr3E1 E:9-251 Ntn/PP2C Ntn Proteasome subunits
e4cr3F1 F:2-234 Ntn/PP2C Ntn Proteasome subunits
e4cr3G1 G:4-248 Ntn/PP2C Ntn Proteasome subunits
e4cr3H1 H:174-360 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4cr3H2 H:361-456 Histone-like Histone-related AAA+ ATPase lid domain
e4cr3I2 I:75-163 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4cr3I3 I:164-351 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4cr3I1 I:352-436 Histone-like Histone-related AAA+ ATPase lid domain
e4cr3J3 J:67-129 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4cr3J1 J:130-319 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4cr3J2 J:319-396 Histone-like Histone-related AAA+ ATPase lid domain
e4cr3K4 K:89-153 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4cr3K2 K:155-341 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4cr3K3 K:342-428 Histone-like Histone-related AAA+ ATPase lid domain
e4cr3L3 L:67-162 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4cr3L1 L:163-352 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4cr3L2 L:352-427 Histone-like Histone-related AAA+ ATPase lid domain
e4cr3M3 M:74-85,M:113-163 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4cr3M1 M:164-352 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4cr3M2 M:352-434 Histone-like Histone-related AAA+ ATPase lid domain
e4cr3N3 N:4-306 Repetitive alpha hairpins 26S proteasome subunit Rpn2 N-terminal domain 26S proteasome subunit Rpn2 N-terminal domain
e4cr3N2 N:307-754 Repetitive alpha hairpins Proteasome/cyclosome (PC) repeat Proteasome/cyclosome (PC) repeat
e4cr3N1 N:755-787,N:860-925 26S proteasome subunit Rpn2 C-terminal domain 26S proteasome subunit Rpn2 C-terminal domain 26S proteasome subunit Rpn2 C-terminal domain
e4cr3O1 O:1-278 Repetitive alpha hairpins ARM repeat ARM repeat
e4cr3O2 O:279-356 HTH HTH winged
e4cr3O3 O:357-387 26S proteasome regulatory subunits C-terminal helices 26S proteasome regulatory subunit RPN9 C-terminal helix 26S proteasome regulatory subunit RPN9 C-terminal helix
e4cr3P3 P:28-329 Repetitive alpha hairpins ARM repeat ARM repeat
e4cr3P1 P:330-407 HTH HTH winged
e4cr3P2 P:408-442 26S proteasome regulatory subunits C-terminal helices 26S proteasome regulatory subunit RPN5 C-terminal helix 26S proteasome regulatory subunit RPN5 C-terminal helix
e4cr3Q1 Q:1-328 Repetitive alpha hairpins ARM repeat ARM repeat
e4cr3Q4 Q:326-405 HTH HTH winged
e4cr3Q3 Q:405-431 26S proteasome regulatory subunits C-terminal helices 26S proteasome regulatory subunit RPN6 C-termial helix 26S proteasome regulatory subunit RPN6 C-termial helix
e4cr3R2 R:23-319 Repetitive alpha hairpins ARM repeat ARM repeat
e4cr3R1 R:320-396 HTH HTH winged
e4cr3R3 R:397-422 26S proteasome regulatory subunits C-terminal helices 26S proteasome regulatory subunit RPN7 C-terminal helix 26S proteasome regulatory subunit RPN7 C-terminal helix
e4cr3S4 S:126-369 Repetitive alpha hairpins ARM repeat ARM repeat
e4cr3S2 S:370-452 HTH HTH winged
e4cr3S3 S:453-478 26S proteasome regulatory subunits C-terminal helices 26S proteasome regulatory subunit RPN3 C-terminal helix 26S proteasome regulatory subunit RPN3 C-terminal helix
e4cr3T2 T:1-183 Repetitive alpha hairpins ARM repeat ARM repeat
e4cr3T1 T:184-272 HTH HTH winged
e4cr3U1 U:5-176 Cytidine deaminase-like Cytidine deaminase-like Cytidine deaminase-like
e4cr3U2 U:188-235,U:259-308 26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain 26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain 26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain
e4cr3V1 V:23-205 Cytidine deaminase-like Cytidine deaminase-like Cytidine deaminase-like
e4cr3V2 V:206-298 26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain 26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain 26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain
e4cr3W1 W:1-197 HAD domain-like HAD domain-related vWA-like
e4cr3X1 X:7-133 PH domain-like PH domain-like PH domain-like
e4cr3Z3 Z:49-365 Repetitive alpha hairpins 26S proteasome subunit Rpn2 N-terminal domain 26S proteasome subunit Rpn2 N-terminal domain
e4cr3Z2 Z:359-625,Z:736-910 Repetitive alpha hairpins Proteasome/cyclosome (PC) repeat Proteasome/cyclosome (PC) repeat

Structural contacts of domain e4cr3O1 of H-group "ARM repeat":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4cr3P3 O:x,y,z->P:X,Y,Z ARM repeat Interaction Interface Pymol
e4cr3W1 O:x,y,z->W:X,Y,Z HAD domain-related Interaction Interface Pymol
e4cr3W1 O:X,Y,Z->L:x,y,z HAD domain-related Interaction Interface Pymol