ECOD: domain e4crnP2

Domain ID e4crnP2

A: beta barrels
X: cradle loop barrel
H: RIFT-related
T: Alanine racemase-C
F: GTP_EFTU_D2

UID:	001318431
Type:	Automatic domain
Parent:	e2c78A1
Range:	P:480-574
PDB:	4crn
PDB Description:	ERF3 IN RIBOSOME BOUND ERF1-ERF3-GDPNP COMPLEX
UniProt:	P05453
Hsap BLAST neighbor:	Q8IYD1
Species:	Saccharomyces cerevisiae

Domain
In chain context
In PDB context

Structure of domain e4crnP2

Domains in the same chain:

Download Pymol

e4crnP1	P:255-483	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e4crnP2	P:480-574	cradle loop barrel	RIFT-related	Alanine racemase-C
e4crnP3	P:575-684	cradle loop barrel	RIFT-related	Aminomethyltransferase beta-barrel domain

Domains in the same PDB:

e4crnP1	P:255-483	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e4crnP2	P:480-574	cradle loop barrel	RIFT-related	Alanine racemase-C
e4crnP3	P:575-684	cradle loop barrel	RIFT-related	Aminomethyltransferase beta-barrel domain
e4crnX1	X:1-139	N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1	N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1	N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1
e4crnX3	X:140-273	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e4crnX2	X:274-422	Bacillus chorismate mutase-like	L30e-like	L30e-like

Structural contacts of domain e4crnP2 of H-group "RIFT-related":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e4crnX3	P:x,y,z->X:X,Y,Z	Ribonuclease H-like	Interaction Interface Pymol