Domain ID e4csu92

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  • A: beta complex topology
  • X: Obg GTP-binding protein N-terminal domain
  • H: Obg GTP-binding protein N-terminal domain
  • T: Obg GTP-binding protein N-terminal domain
  • F: GTP1_OBG
UID: 001294222
Type: Automatic domain
Parent: e1udxA1
Range: 9:4-158
PDB: 4csu
PDB Description: GTPASE OBGE/CGTA
UniProt: P42641
Hsap BLAST neighbor: Q9H4K7
Species:

Structure of domain e4csu92

Domains in the same chain:

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e4csu92 9:4-158 Obg GTP-binding protein N-terminal domain Obg GTP-binding protein N-terminal domain Obg GTP-binding protein N-terminal domain
e4csu91 9:159-337 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases

Domains in the same PDB:

e4csu01 0:1-77 Ribosomal protein bL28-related Ribosomal protein bL28-related Ribosomal protein L28
e4csu11 1:1-63 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e4csu21 2:1-58 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e
e4csu31 3:1-56 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4csu41 4:3-53 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4csu51 5:1-68,5:160-234 a+b domain in Ribosomal protein L1 a+b domain in Ribosomal protein L1 a+b domain in Ribosomal protein L1
e4csu52 5:69-159 Flavodoxin-like Rossmann-like domain in Ribosomal protein L1 Rossmann-like domain in Ribosomal protein L1
e4csu61 6:1-46 50S ribosomal protein L34 50S ribosomal protein L34 50S ribosomal protein L34
e4csu71 7:1-64 Ribosomal protein L35p Ribosomal protein L35p Ribosomal protein L35p
e4csu81 8:1-38 Ribosomal protein L36 Ribosomal protein L36 Ribosomal protein L36
e4csu92 9:4-158 Obg GTP-binding protein N-terminal domain Obg GTP-binding protein N-terminal domain Obg GTP-binding protein N-terminal domain
e4csu91 9:159-337 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4csuC1 C:1-124 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4csuC2 C:125-272 SH3 SH3 SH3
e4csuD1 D:1-209 cradle loop barrel RIFT-related Alanine racemase-C
e4csuE1 E:1-201 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e4csuF1 F:1-178 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e4csuG1 G:1-81 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e4csuG2 G:82-176 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e4csuH2 H:1-55 L9 N-domain-like L9 N-domain-like L9 N-domain-like
e4csuH3 H:56-149 Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain
e4csuI1 I:73-141 HTH HTH Ribosomal protein L11, C-terminal domain
e4csuJ1 J:1-142 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e4csuK1 K:1-122 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e4csuL1 L:2-144 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e4csuM1 M:1-136 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal protein L10e
e4csuN1 N:1-121 Enolase-N/ribosomal protein Prokaryotic ribosomal protein L17 Prokaryotic ribosomal protein L17
e4csuO1 O:2-117 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e4csuP1 P:1-114 SH3 SH3 SH3
e4csuQ1 Q:1-117 PABP domain-like Ribosomal protein L20 Ribosomal protein L20
e4csuR1 R:1-103 Ribosomal protein L21p Ribosomal protein L21p Ribosomal protein L21p
e4csuS1 S:1-110 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e4csuT1 T:1-94 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e4csuU1 U:2-103 SH3 SH3 SH3
e4csuW1 W:1-94 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e4csuY1 Y:6-84 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal L27 protein

Structural contacts of domain e4csu92 of H-group "Obg GTP-binding protein N-terminal domain":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4csuG2 9:x,y,z->G:X,Y,Z Ribosomal protein L6 Interaction Interface Pymol
e4csuG2 9:x,y,z->M:X,Y,Z Ribosomal protein L6 Interaction Interface Pymol