ECOD: domain e4csyB1

Domain ID e4csyB1

A: few secondary structure elements
X: EGF-like
H: EGF-related
T: Complement control module/SCR domain
F: Sushi

UID:	001388595
Type:	Automatic domain
Parent:	e2q7zA12
Range:	B:219-280
Ligands:	NAG
PDB:	4csy
PDB Description:	E-SELECTIN
UniProt:	P16581
Hsap BLAST neighbor:	P16581
Species:	Homo sapiens

Domain
In chain context
In PDB context

Structure of domain e4csyB1

Domains in the same chain:

Download Pymol

e4csyB3	B:1-118	C-type lectin-like	C-type lectin-like	C-type lectin-like
e4csyB4	B:119-157	EGF-like	EGF-related	EGF/Laminin
e4csyB2	B:157-223	EGF-like	EGF-related	Complement control module/SCR domain
e4csyB1	B:219-280	EGF-like	EGF-related	Complement control module/SCR domain

Domains in the same PDB:

e4csyA3	A:1-118	C-type lectin-like	C-type lectin-like	C-type lectin-like
e4csyA4	A:119-157	EGF-like	EGF-related	EGF/Laminin
e4csyA2	A:157-223	EGF-like	EGF-related	Complement control module/SCR domain
e4csyA1	A:219-280	EGF-like	EGF-related	Complement control module/SCR domain
e4csyB3	B:1-118	C-type lectin-like	C-type lectin-like	C-type lectin-like
e4csyB4	B:119-157	EGF-like	EGF-related	EGF/Laminin
e4csyB2	B:157-223	EGF-like	EGF-related	Complement control module/SCR domain
e4csyB1	B:219-280	EGF-like	EGF-related	Complement control module/SCR domain

Structural contacts of domain e4csyB1 of H-group "EGF-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e4csyA3	B:x,y,z->A:X,Y,Z-1	C-type lectin-like	Interaction Interface Pymol
e4csyA1	B:X-2,Y,Z->A:x,y,z	EGF-related	Interaction Interface Pymol
e4csyA2	B:X-1,Y,Z->A:x,y,z	EGF-related	Interaction Interface Pymol