ECOD: domain e4d0md1

Domain ID e4d0md1

A: a/b three-layered sandwiches
X: P-loop domains-like
H: P-loop domains-related
T: P-loop containing nucleoside triphosphate hydrolases
F: Ras

UID:	001293617
Type:	Automatic domain
Parent:	e1mh1A1
Range:	d:6-178
Ligands:	GSP MG
DrugDomain:	DB01864
PDB:	4d0m
PDB Description:	RAS-RELATED PROTEIN RAB-11A
UniProt:	P62491
Hsap BLAST neighbor:	P62491
Species:	Homo sapiens

Domains in the same chain:

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e4d0md1	d:6-178	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases

Domains in the same PDB:

e4d0mA2	A:128-234	Repetitive alpha hairpins	ARM repeat	ARM repeat
e4d0mA1	A:235-242,A:306-784	Protein kinase/SAICAR synthase/ATP-grasp	Protein kinase/SAICAR synthase/ATP-grasp	Protein kinase
e4d0mB1	B:6-178	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e4d0mc2	c:128-234	Repetitive alpha hairpins	ARM repeat	ARM repeat
e4d0mc1	c:235-242,c:306-784	Protein kinase/SAICAR synthase/ATP-grasp	Protein kinase/SAICAR synthase/ATP-grasp	Protein kinase
e4d0mC2	C:128-234	Repetitive alpha hairpins	ARM repeat	ARM repeat
e4d0mC1	C:235-242,C:306-784	Protein kinase/SAICAR synthase/ATP-grasp	Protein kinase/SAICAR synthase/ATP-grasp	Protein kinase
e4d0md1	d:6-178	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e4d0mD1	D:6-178	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e4d0mg2	g:128-234	Repetitive alpha hairpins	ARM repeat	ARM repeat
e4d0mg1	g:235-242,g:306-784	Protein kinase/SAICAR synthase/ATP-grasp	Protein kinase/SAICAR synthase/ATP-grasp	Protein kinase
e4d0mG2	G:128-234	Repetitive alpha hairpins	ARM repeat	ARM repeat
e4d0mG1	G:235-242,G:306-784	Protein kinase/SAICAR synthase/ATP-grasp	Protein kinase/SAICAR synthase/ATP-grasp	Protein kinase
e4d0mh1	h:6-178	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e4d0mH1	H:6-178	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e4d0mI2	I:128-234	Repetitive alpha hairpins	ARM repeat	ARM repeat
e4d0mI1	I:235-242,I:306-784	Protein kinase/SAICAR synthase/ATP-grasp	Protein kinase/SAICAR synthase/ATP-grasp	Protein kinase
e4d0mJ1	J:6-178	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e4d0mM2	M:128-234	Repetitive alpha hairpins	ARM repeat	ARM repeat
e4d0mM1	M:235-242,M:306-784	Protein kinase/SAICAR synthase/ATP-grasp	Protein kinase/SAICAR synthase/ATP-grasp	Protein kinase
e4d0mN1	N:6-178	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e4d0mO2	O:128-234	Repetitive alpha hairpins	ARM repeat	ARM repeat
e4d0mO1	O:235-242,O:306-784	Protein kinase/SAICAR synthase/ATP-grasp	Protein kinase/SAICAR synthase/ATP-grasp	Protein kinase
e4d0mP1	P:6-178	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e4d0mQ2	Q:128-234	Repetitive alpha hairpins	ARM repeat	ARM repeat
e4d0mQ1	Q:235-242,Q:306-784	Protein kinase/SAICAR synthase/ATP-grasp	Protein kinase/SAICAR synthase/ATP-grasp	Protein kinase
e4d0mR1	R:6-178	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e4d0mS2	S:128-234	Repetitive alpha hairpins	ARM repeat	ARM repeat
e4d0mS1	S:235-242,S:306-784	Protein kinase/SAICAR synthase/ATP-grasp	Protein kinase/SAICAR synthase/ATP-grasp	Protein kinase
e4d0mT1	T:6-178	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e4d0mW2	W:128-234	Repetitive alpha hairpins	ARM repeat	ARM repeat
e4d0mW1	W:235-242,W:306-784	Protein kinase/SAICAR synthase/ATP-grasp	Protein kinase/SAICAR synthase/ATP-grasp	Protein kinase
e4d0mX1	X:6-178	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e4d0mY2	Y:128-234	Repetitive alpha hairpins	ARM repeat	ARM repeat
e4d0mY1	Y:235-242,Y:306-784	Protein kinase/SAICAR synthase/ATP-grasp	Protein kinase/SAICAR synthase/ATP-grasp	Protein kinase
e4d0mZ1	Z:6-178	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases

Structural contacts of domain e4d0md1 of H-group "P-loop domains-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e4d0mc2	d:x,y,z->c:X,Y,Z	ARM repeat	Interaction Interface Pymol
e4d0mY2	d:x,y,z->Y:X,Y,Z	ARM repeat	Interaction Interface Pymol