ECOD: domain e4d10J2

Domain ID e4d10J2

A: alpha superhelices
X: Repetitive alpha hairpins
H: ARM repeat
T: ARM repeat
F: Unmapped domains

UID:	001322545
Type:	Automatic domain
Parent:	e3t5vB1
Range:	J:30-332
PDB:	4d10
PDB Description:	COP9 SIGNALOSOME COMPLEX SUBUNIT 2
UniProt:	P61201
Hsap BLAST neighbor:	P61201
Species:	Homo sapiens

Domain
In chain context
In PDB context

Structure of domain e4d10J2

Domains in the same chain:

Download Pymol

e4d10J2	J:30-332	Repetitive alpha hairpins	ARM repeat	ARM repeat
e4d10J1	J:333-402	HTH	HTH	winged
e4d10J3	J:403-443	26S proteasome regulatory subunits C-terminal helices	26S proteasome regulatory subunit RPN9 C-terminal helix	26S proteasome regulatory subunit RPN9 C-terminal helix

Domains in the same PDB:

e4d10A1	A:77-403	Repetitive alpha hairpins	ARM repeat	ARM repeat
e4d10A2	A:404-464	HTH	HTH	winged
e4d10A3	A:465-505	26S proteasome regulatory subunits C-terminal helices	26S proteasome regulatory subunit RPN7 C-terminal helix	26S proteasome regulatory subunit RPN7 C-terminal helix
e4d10B2	B:30-343	Repetitive alpha hairpins	ARM repeat	ARM repeat
e4d10B1	B:344-413	HTH	HTH	winged
e4d10B3	B:414-443	26S proteasome regulatory subunits C-terminal helices	26S proteasome regulatory subunit RPN9 C-terminal helix	26S proteasome regulatory subunit RPN9 C-terminal helix
e4d10C3	C:3-220	Repetitive alpha hairpins	ARM repeat	ARM repeat
e4d10C1	C:221-364	HTH	HTH	winged
e4d10C2	C:365-403	26S proteasome regulatory subunits C-terminal helices	26S proteasome regulatory subunit RPN3 C-terminal helix	26S proteasome regulatory subunit RPN3 C-terminal helix
e4d10D1	D:1-292	Repetitive alpha hairpins	ARM repeat	ARM repeat
e4d10D2	D:293-364	HTH	HTH	winged
e4d10D3	D:365-406	26S proteasome regulatory subunits C-terminal helices	26S proteasome regulatory subunit RPN5 C-terminal helix	26S proteasome regulatory subunit RPN5 C-terminal helix
e4d10E1	E:24-250	Cytidine deaminase-like	Cytidine deaminase-like	Cytidine deaminase-like
e4d10E2	E:251-333	26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain	26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain	26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain
e4d10F1	F:29-207	Cytidine deaminase-like	Cytidine deaminase-like	Cytidine deaminase-like
e4d10F2	F:208-316	26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain	26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain	26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain
e4d10G2	G:8-86	Repetitive alpha hairpins	ARM repeat	ARM repeat
e4d10G1	G:87-164	HTH	HTH	winged
e4d10G3	G:165-215	26S proteasome regulatory subunits C-terminal helices	26S proteasome regulatory subunit RPN9 C-terminal helix	26S proteasome regulatory subunit RPN9 C-terminal helix
e4d10H1	H:11-114	Repetitive alpha hairpins	ARM repeat	ARM repeat
e4d10H2	H:115-167,H:194-209	HTH	HTH	winged
e4d10I3	I:77-393	Repetitive alpha hairpins	ARM repeat	ARM repeat
e4d10I2	I:394-454	HTH	HTH	winged
e4d10I1	I:455-505	26S proteasome regulatory subunits C-terminal helices	26S proteasome regulatory subunit RPN7 C-terminal helix	26S proteasome regulatory subunit RPN7 C-terminal helix
e4d10J2	J:30-332	Repetitive alpha hairpins	ARM repeat	ARM repeat
e4d10J1	J:333-402	HTH	HTH	winged
e4d10J3	J:403-443	26S proteasome regulatory subunits C-terminal helices	26S proteasome regulatory subunit RPN9 C-terminal helix	26S proteasome regulatory subunit RPN9 C-terminal helix
e4d10K1	K:3-220	Repetitive alpha hairpins	ARM repeat	ARM repeat
e4d10K3	K:221-364	HTH	HTH	winged
e4d10K2	K:365-403	26S proteasome regulatory subunits C-terminal helices	26S proteasome regulatory subunit RPN3 C-terminal helix	26S proteasome regulatory subunit RPN3 C-terminal helix
e4d10L3	L:182-289	Repetitive alpha hairpins	ARM repeat	ARM repeat
e4d10L1	L:291-364	HTH	HTH	winged
e4d10L2	L:365-406	26S proteasome regulatory subunits C-terminal helices	26S proteasome regulatory subunit RPN5 C-terminal helix	26S proteasome regulatory subunit RPN5 C-terminal helix
e4d10M2	M:24-250	Cytidine deaminase-like	Cytidine deaminase-like	Cytidine deaminase-like
e4d10M1	M:251-333	26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain	26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain	26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain
e4d10N1	N:29-207	Cytidine deaminase-like	Cytidine deaminase-like	Cytidine deaminase-like
e4d10N2	N:208-316	26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain	26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain	26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain
e4d10O3	O:8-86	Repetitive alpha hairpins	ARM repeat	ARM repeat
e4d10O2	O:87-164	HTH	HTH	winged
e4d10O1	O:165-215	26S proteasome regulatory subunits C-terminal helices	26S proteasome regulatory subunit RPN9 C-terminal helix	26S proteasome regulatory subunit RPN9 C-terminal helix
e4d10P2	P:11-114	Repetitive alpha hairpins	ARM repeat	ARM repeat
e4d10P1	P:115-167,P:194-209	HTH	HTH	winged

Structural contacts of domain e4d10J2 of H-group "ARM repeat":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e4d10I3	J:x,y,z->I:X,Y,Z	ARM repeat	Interaction Interface Pymol
e4d10P2	J:x,y,z->P:X-1,Y,Z	ARM repeat	Interaction Interface Pymol
e4d10D2	J:X,Y,Z->D:x,y,z	HTH	Interaction Interface Pymol
e4d10D1	J:X,Y,Z->D:x,y,z	ARM repeat	Interaction Interface Pymol
e4d10B2	J:x,y,z->B:X,Y,Z	ARM repeat	Interaction Interface Pymol
e4d10B1	J:x,y,z->B:X,Y,Z	HTH	Interaction Interface Pymol
e4d10A1	J:x,y,z->A:X-1,Y-1,Z	ARM repeat	Interaction Interface Pymol