Domain ID e4d8rd5

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  • A: mixed a+b and a/b
  • X: Zincin-like
  • H: GroEL-intermediate domain like
  • T: GroEL-intermediate domain like
  • F: Cpn60_TCP1
UID: 001258345
Type: Automatic domain
Parent: e1q3qA2
Range: d:142-210,d:370-408
Ligands: ADP BEF MG
PDB: 4d8r
PDB Description:
Hsap BLAST neighbor: P50991
Species:

Structure of domain e4d8rd5

Domains in the same chain:

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e4d8rd6 d:6-141,d:409-528 GroEL equatorial domain-like GroEL equatorial domain-like GroEL equatorial domain-like
e4d8rd5 d:142-210,d:370-408 Zincin-like GroEL-intermediate domain like GroEL-intermediate domain like
e4d8rd4 d:211-369 The "swivelling" beta/beta/alpha domains The "swivelling" beta/beta/alpha domain The "swivelling" beta/beta/alpha domain

Domains in the same PDB:

e4d8ra1 a:5-147,a:412-550 GroEL equatorial domain-like GroEL equatorial domain-like GroEL equatorial domain-like
e4d8ra2 a:154-219,a:376-411 Zincin-like GroEL-intermediate domain like GroEL-intermediate domain like
e4d8ra3 a:220-375 The "swivelling" beta/beta/alpha domains The "swivelling" beta/beta/alpha domain The "swivelling" beta/beta/alpha domain
e4d8rb1 b:1-142,b:392-518 GroEL equatorial domain-like GroEL equatorial domain-like GroEL equatorial domain-like
e4d8rb2 b:143-207,b:356-391 Zincin-like GroEL-intermediate domain like GroEL-intermediate domain like
e4d8rb3 b:208-355 The "swivelling" beta/beta/alpha domains The "swivelling" beta/beta/alpha domain The "swivelling" beta/beta/alpha domain
e4d8rc1 c:6-142,c:411-532 GroEL equatorial domain-like GroEL equatorial domain-like GroEL equatorial domain-like
e4d8rc2 c:143-220,c:375-410 Zincin-like GroEL-intermediate domain like GroEL-intermediate domain like
e4d8rc3 c:221-370,c:1054-1056 The "swivelling" beta/beta/alpha domains The "swivelling" beta/beta/alpha domain The "swivelling" beta/beta/alpha domain
e4d8rd6 d:6-141,d:409-528 GroEL equatorial domain-like GroEL equatorial domain-like GroEL equatorial domain-like
e4d8rd5 d:142-210,d:370-408 Zincin-like GroEL-intermediate domain like GroEL-intermediate domain like
e4d8rd4 d:211-369 The "swivelling" beta/beta/alpha domains The "swivelling" beta/beta/alpha domain The "swivelling" beta/beta/alpha domain
e4d8re8 e:25-162,e:438-559 GroEL equatorial domain-like GroEL equatorial domain-like GroEL equatorial domain-like
e4d8re9 e:163-240,e:402-437 Zincin-like GroEL-intermediate domain like GroEL-intermediate domain like
e4d8re7 e:241-401 The "swivelling" beta/beta/alpha domains The "swivelling" beta/beta/alpha domain The "swivelling" beta/beta/alpha domain
e4d8rf1 f:5-140,f:399-538 GroEL equatorial domain-like GroEL equatorial domain-like GroEL equatorial domain-like
e4d8rf2 f:141-202,f:362-398 Zincin-like GroEL-intermediate domain like GroEL-intermediate domain like
e4d8rf3 f:203-361 The "swivelling" beta/beta/alpha domains The "swivelling" beta/beta/alpha domain The "swivelling" beta/beta/alpha domain
e4d8rg5 g:2-146,g:408-527 GroEL equatorial domain-like GroEL equatorial domain-like GroEL equatorial domain-like
e4d8rg4 g:147-215,g:372-407 Zincin-like GroEL-intermediate domain like GroEL-intermediate domain like
e4d8rg3 g:216-371 The "swivelling" beta/beta/alpha domains The "swivelling" beta/beta/alpha domain The "swivelling" beta/beta/alpha domain
e4d8rh1 h:7-148,h:418-549 GroEL equatorial domain-like GroEL equatorial domain-like GroEL equatorial domain-like
e4d8rh2 h:149-223,h:380-417 Zincin-like GroEL-intermediate domain like GroEL-intermediate domain like
e4d8rh3 h:224-379 The "swivelling" beta/beta/alpha domains The "swivelling" beta/beta/alpha domain The "swivelling" beta/beta/alpha domain
e4d8ri1 i:5-147,i:412-550 GroEL equatorial domain-like GroEL equatorial domain-like GroEL equatorial domain-like
e4d8ri2 i:154-219,i:376-411 Zincin-like GroEL-intermediate domain like GroEL-intermediate domain like
e4d8ri3 i:220-375 The "swivelling" beta/beta/alpha domains The "swivelling" beta/beta/alpha domain The "swivelling" beta/beta/alpha domain
e4d8rj1 j:1-142,j:392-518 GroEL equatorial domain-like GroEL equatorial domain-like GroEL equatorial domain-like
e4d8rj2 j:143-207,j:356-391 Zincin-like GroEL-intermediate domain like GroEL-intermediate domain like
e4d8rj3 j:208-355 The "swivelling" beta/beta/alpha domains The "swivelling" beta/beta/alpha domain The "swivelling" beta/beta/alpha domain
e4d8rk1 k:6-142,k:411-532 GroEL equatorial domain-like GroEL equatorial domain-like GroEL equatorial domain-like
e4d8rk2 k:143-220,k:375-410 Zincin-like GroEL-intermediate domain like GroEL-intermediate domain like
e4d8rk3 k:221-370,k:1054-1056 The "swivelling" beta/beta/alpha domains The "swivelling" beta/beta/alpha domain The "swivelling" beta/beta/alpha domain
e4d8rl6 l:6-141,l:409-528 GroEL equatorial domain-like GroEL equatorial domain-like GroEL equatorial domain-like
e4d8rl5 l:142-210,l:370-408 Zincin-like GroEL-intermediate domain like GroEL-intermediate domain like
e4d8rl4 l:211-369 The "swivelling" beta/beta/alpha domains The "swivelling" beta/beta/alpha domain The "swivelling" beta/beta/alpha domain
e4d8rm8 m:25-162,m:438-559 GroEL equatorial domain-like GroEL equatorial domain-like GroEL equatorial domain-like
e4d8rm9 m:163-240,m:402-437 Zincin-like GroEL-intermediate domain like GroEL-intermediate domain like
e4d8rm7 m:241-401 The "swivelling" beta/beta/alpha domains The "swivelling" beta/beta/alpha domain The "swivelling" beta/beta/alpha domain
e4d8rn1 n:5-140,n:399-538 GroEL equatorial domain-like GroEL equatorial domain-like GroEL equatorial domain-like
e4d8rn2 n:141-202,n:362-398 Zincin-like GroEL-intermediate domain like GroEL-intermediate domain like
e4d8rn3 n:203-361 The "swivelling" beta/beta/alpha domains The "swivelling" beta/beta/alpha domain The "swivelling" beta/beta/alpha domain
e4d8ro5 o:2-146,o:408-527 GroEL equatorial domain-like GroEL equatorial domain-like GroEL equatorial domain-like
e4d8ro4 o:147-215,o:372-407 Zincin-like GroEL-intermediate domain like GroEL-intermediate domain like
e4d8ro3 o:216-371 The "swivelling" beta/beta/alpha domains The "swivelling" beta/beta/alpha domain The "swivelling" beta/beta/alpha domain
e4d8rp1 p:7-148,p:418-549 GroEL equatorial domain-like GroEL equatorial domain-like GroEL equatorial domain-like
e4d8rp2 p:149-223,p:380-417 Zincin-like GroEL-intermediate domain like GroEL-intermediate domain like
e4d8rp3 p:224-379 The "swivelling" beta/beta/alpha domains The "swivelling" beta/beta/alpha domain The "swivelling" beta/beta/alpha domain

Structural contacts of domain e4d8rd5 of H-group "GroEL-intermediate domain like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4d8rb3 d:x,y,z->b:X,Y,Z The "swivelling" beta/beta/alpha domain Interaction Interface Pymol
e4d8ra1 d:X,Y,Z->a:x,y,z GroEL equatorial domain-like Interaction Interface Pymol
e4d8ri2 d:x,y,z->i:X-1,Y,Z GroEL-intermediate domain like Interaction Interface Pymol