ECOD: domain e4dcyB1

Domain ID e4dcyB1

A: a+b two layers
X: Alpha-beta plaits
H: Oligo-peptide binding protein (OPPA) insertion domain
T: Oligo-peptide binding protein (OPPA) insertion domain
F: SBP_bac_5

UID:	001298844
Type:	Automatic domain
Parent:	e4onyA2
Range:	B:20-140
Ligands:	ACT L2M
PDB:	4dcy
PDB Description:	NICKEL-BINDING PERIPLASMIC PROTEIN
UniProt:	P33590
Species:

Domain
In chain context
In PDB context

Structure of domain e4dcyB1

Domains in the same chain:

Download Pymol

e4dcyB2	B:3-19,B:141-245,B:471-500	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e4dcyB1	B:20-140	Alpha-beta plaits	Oligo-peptide binding protein (OPPA) insertion domain	Oligo-peptide binding protein (OPPA) insertion domain
e4dcyB3	B:246-470	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II

Domains in the same PDB:

e4dcyA2	A:3-19,A:141-245,A:471-500	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e4dcyA1	A:20-140	Alpha-beta plaits	Oligo-peptide binding protein (OPPA) insertion domain	Oligo-peptide binding protein (OPPA) insertion domain
e4dcyA3	A:246-470	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e4dcyB2	B:3-19,B:141-245,B:471-500	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e4dcyB1	B:20-140	Alpha-beta plaits	Oligo-peptide binding protein (OPPA) insertion domain	Oligo-peptide binding protein (OPPA) insertion domain
e4dcyB3	B:246-470	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II

Structural contacts of domain e4dcyB1 of H-group "Oligo-peptide binding protein (OPPA) insertion domain":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e4dcyA2	B:x,y,z->A:X,Y,Z	Periplasmic binding protein-like II	Interaction Interface Pymol
e4dcyA1	B:x,y,z->A:X,Y,Z	Oligo-peptide binding protein (OPPA) insertion domain	Interaction Interface Pymol