Domain ID e4ddqE16

Download files:
  • A: a+b two layers
  • X: a+b domain in type II DNA topoisomerase
  • H: a+b domain in type II DNA topoisomerase
  • T: a+b domain in type II DNA topoisomerase
  • F: DNA_topoisoIV
UID: 001227464
Type: Automatic domain
Parent: e1bjtA4
Range: E:162-344
Ligands: K
PDB: 4ddq
PDB Description: DNA gyrase subunit A
UniProt: P05653
Species: Bacillus subtilis

Structure of domain e4ddqE16

Domains in the same chain:

e4ddqE18 E:32-161 HTH HTH winged
e4ddqE16 E:162-344 a+b domain in type II DNA topoisomerase a+b domain in type II DNA topoisomerase a+b domain in type II DNA topoisomerase
e4ddqE17 E:345-489 alpha-helical domain in type II DNA topoisomerase alpha-helical domain in type II DNA topoisomerase alpha-helical domain in type II DNA topoisomerase

Domains in the same PDB:

e4ddqA5 A:32-161 HTH HTH winged
e4ddqA4 A:162-344 a+b domain in type II DNA topoisomerase a+b domain in type II DNA topoisomerase a+b domain in type II DNA topoisomerase
e4ddqA2 A:345-489 alpha-helical domain in type II DNA topoisomerase alpha-helical domain in type II DNA topoisomerase alpha-helical domain in type II DNA topoisomerase
e4ddqB18 B:33-161 HTH HTH winged
e4ddqB16 B:162-344 a+b domain in type II DNA topoisomerase a+b domain in type II DNA topoisomerase a+b domain in type II DNA topoisomerase
e4ddqB17 B:345-489 alpha-helical domain in type II DNA topoisomerase alpha-helical domain in type II DNA topoisomerase alpha-helical domain in type II DNA topoisomerase
e4ddqC18 C:33-161 HTH HTH winged
e4ddqC16 C:162-344 a+b domain in type II DNA topoisomerase a+b domain in type II DNA topoisomerase a+b domain in type II DNA topoisomerase
e4ddqC17 C:345-489 alpha-helical domain in type II DNA topoisomerase alpha-helical domain in type II DNA topoisomerase alpha-helical domain in type II DNA topoisomerase
e4ddqD12 D:31-161 HTH HTH winged
e4ddqD10 D:162-344 a+b domain in type II DNA topoisomerase a+b domain in type II DNA topoisomerase a+b domain in type II DNA topoisomerase
e4ddqD11 D:345-489 alpha-helical domain in type II DNA topoisomerase alpha-helical domain in type II DNA topoisomerase alpha-helical domain in type II DNA topoisomerase
e4ddqE18 E:32-161 HTH HTH winged
e4ddqE16 E:162-344 a+b domain in type II DNA topoisomerase a+b domain in type II DNA topoisomerase a+b domain in type II DNA topoisomerase
e4ddqE17 E:345-489 alpha-helical domain in type II DNA topoisomerase alpha-helical domain in type II DNA topoisomerase alpha-helical domain in type II DNA topoisomerase
e4ddqF21 F:34-161 HTH HTH winged
e4ddqF19 F:162-344 a+b domain in type II DNA topoisomerase a+b domain in type II DNA topoisomerase a+b domain in type II DNA topoisomerase
e4ddqF20 F:345-489 alpha-helical domain in type II DNA topoisomerase alpha-helical domain in type II DNA topoisomerase alpha-helical domain in type II DNA topoisomerase

Structural contacts of domain e4ddqE16 of H-group "a+b domain in type II DNA topoisomerase":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4ddqB16 E:x,y,z->B:-X-1/2,-Y-1,Z-1/2 a+b domain in type II DNA topoisomerase Interaction Interface Pymol
e4ddqC17 E:x,y,z->C:-X,Y-1/2,-Z-1/2 alpha-helical domain in type II DNA topoisomerase Interaction Interface Pymol
e4ddqB16 E:x,y,z->B:X,Y,Z a+b domain in type II DNA topoisomerase Interaction Interface Pymol
e4ddqF20 E:x,y,z->F:-X,Y-1/2,-Z-1/2 alpha-helical domain in type II DNA topoisomerase Interaction Interface Pymol