Domain ID e4djfB1

Download files:
  • A: a/b barrels
  • X: TIM beta/alpha-barrel
  • H: TIM barrels
  • T: TIM barrels
  • F: Pterin_bind
UID: 000983757
Type: Automatic domain
Parent: e1eyeA1
Range: B:1-262
Ligands: C2F CA COB
PDB: 4djf
PDB Description: 5-methyltetrahydrofolate corrinoid/iron sulfur protein methyltransferase
UniProt: Q46389
Hsap BLAST neighbor: Q99707
Species: Moorella thermoacetica

Structure of domain e4djfB1

Domains in the same chain:

e4djfB1 B:1-262 TIM beta/alpha-barrel TIM barrels TIM barrels

Domains in the same PDB:

e4djfA1 A:1-262 TIM beta/alpha-barrel TIM barrels TIM barrels
e4djfB1 B:1-262 TIM beta/alpha-barrel TIM barrels TIM barrels
e4djfC3 C:2-58 Fe-S cluster binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunit Fe-S cluster binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunit Fe-S cluster binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunit
e4djfC4 C:59-316 TIM beta/alpha-barrel TIM barrels TIM barrels
e4djfC1 C:317-442 B12 binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunit B12 binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunit B12 binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunit
e4djfD1 D:1-323 TIM beta/alpha-barrel TIM barrels TIM barrels
e4djfE3 E:2-58 Fe-S cluster binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunit Fe-S cluster binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunit Fe-S cluster binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunit
e4djfE4 E:59-316 TIM beta/alpha-barrel TIM barrels TIM barrels
e4djfE1 E:317-442 B12 binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunit B12 binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunit B12 binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunit
e4djfF1 F:1-323 TIM beta/alpha-barrel TIM barrels TIM barrels

Structural contacts of domain e4djfB1 of H-group "TIM barrels":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4djfA1 B:x,y,z->A:X,Y,Z TIM barrels Interaction Interface Pymol
e4djfF1 B:X,Y,Z->F:x,y,z TIM barrels Interaction Interface Pymol
e4djfE4 B:X,Y,Z->E:x,y,z TIM barrels Interaction Interface Pymol
e4djfE3 B:X,Y,Z->E:x,y,z Fe-S cluster binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunit Interaction Interface Pymol
e4djfC4 B:X,Y,Z->C:x,y,z TIM barrels Interaction Interface Pymol
e4djfD1 B:X,Y,Z->D:x,y,z TIM barrels Interaction Interface Pymol