Domain ID e4djqB1

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  • A: beta barrels
  • X: cradle loop barrel
  • H: RIFT-related
  • T: acid protease
  • F: RVP
UID: 000959477
Type: Automatic domain
Range: B:1-99
Ligands: M86 PO4
PDB: 4djq
PDB Description: Pol polyprotein
UniProt: Q90K99
Species: Human immunodeficiency virus 1

Structure of domain e4djqB1

Structural contacts of domain e4djqB1 of H-group "RIFT-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4djqA1 B:x,y,z->A:X,Y,Z RIFT-related Interaction Interface Pymol
e4djqA1 B:x,y,z->A:X-1,Y,Z RIFT-related Interaction Interface Pymol
e4djqA1 B:x,y,z->A:-X,Y-1/2,-Z-1/2 RIFT-related Interaction Interface Pymol
e4djqA1 B:x,y,z->A:-X-1/2,-Y,Z-1/2 RIFT-related Interaction Interface Pymol
e4djqA1 B:-X-1/2,-Y,Z-1/2->A:x,y,z RIFT-related Interaction Interface Pymol
e4djqA1 B:-X,Y-1/2,-Z-1/2->A:x,y,z RIFT-related Interaction Interface Pymol
e4djqB1 B:x,y,z->B:-X-1,Y-1/2,-Z-1/2 RIFT-related Interaction Interface Pymol
e4djqB1 B:-X-1,Y-1/2,-Z-1/2->B:x,y,z RIFT-related Interaction Interface Pymol
e4djqB1 B:x,y,z->B:-X,Y-1/2,-Z-1/2 RIFT-related Interaction Interface Pymol
e4djqB1 B:-X,Y-1/2,-Z-1/2->B:x,y,z RIFT-related Interaction Interface Pymol
e4djqB1 B:x,y,z->B:-X-1/2,-Y,Z-1/2 RIFT-related Interaction Interface Pymol
e4djqB1 B:-X-1/2,-Y,Z-1/2->B:x,y,z RIFT-related Interaction Interface Pymol
e4djqB1 B:x,y,z->B:X-1/2,-Y+1/2,-Z-1 RIFT-related Interaction Interface Pymol
e4djqB1 B:X-1/2,-Y+1/2,-Z-1->B:x,y,z RIFT-related Interaction Interface Pymol