| UID: | 000984409 |
|---|---|
| Type: | Automatic domain |
| Parent: | e1zvoC1 |
| Range: | B:1-127 |
| PDB: | 4dk3 |
| PDB Description: | single domain antibody VHH |
| Hsap BLAST neighbor: | P01764 |
| Species: | Lama glama |
Structure of domain e4dk3B1
Domains in the same chain:
| e4dk3B1 | B:1-127 | Immunoglobulin-like beta-sandwich | Immunoglobulin-related | Immunoglobulin/Fibronectin type III/E set domains/PapD-like |
Domains in the same PDB:
Structural contacts of domain e4dk3B1 of H-group "Immunoglobulin-related":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e4dk3D2 | B:X,-Y,-Z->D:x,y,z | Nucleic acid-binding proteins | Interaction Interface Pymol |
| e4dk3B1 | B:x,y,z->B:-X,Y,-Z | Immunoglobulin-related | Interaction Interface Pymol |
| e4dk3B1 | B:-X,Y,-Z->B:x,y,z | Immunoglobulin-related | Interaction Interface Pymol |
| e4dk3B1 | B:x,y,z->B:-X-1/2,-Y+1/2,Z | Immunoglobulin-related | Interaction Interface Pymol |
| e4dk3B1 | B:-X-1/2,-Y+1/2,Z->B:x,y,z | Immunoglobulin-related | Interaction Interface Pymol |
| e4dk3C1 | B:X,-Y,-Z->C:x,y,z | Nucleic acid-binding proteins | Interaction Interface Pymol |
| e4dk3D2 | B:-X-1/2,Y-1/2,-Z->D:x,y,z | Nucleic acid-binding proteins | Interaction Interface Pymol |
| e4dk3C1 | B:-X-1/2,-Y+1/2,Z->C:x,y,z | Nucleic acid-binding proteins | Interaction Interface Pymol |
