Domain ID e4dkaB1

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  • A: beta sandwiches
  • X: Immunoglobulin-like beta-sandwich
  • H: Immunoglobulin-related
  • T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like
  • F: V-set
UID: 000984407
Type: Automatic domain
Parent: e1zvoC1
Range: B:1-127
Ligands: NA
PDB: 4dka
PDB Description: single domain antibody VHH
Hsap BLAST neighbor: P01764
Species: Lama glama

Structure of domain e4dkaB1

Structural contacts of domain e4dkaB1 of H-group "Immunoglobulin-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4dkaC3 B:x,y,z->C:-X+1/2,Y-1/2,-Z Nucleic acid-binding proteins Interaction Interface Pymol
e4dkaA1 B:x,y,z->A:X,Y,Z Immunoglobulin-related Interaction Interface Pymol
e4dkaD3 B:X,Y,Z->D:x,y,z Nucleic acid-binding proteins Interaction Interface Pymol
e4dkaD3 B:x,y,z->D:-X+1/2,Y-1/2,-Z Nucleic acid-binding proteins Interaction Interface Pymol
e4dkaD3 B:x,y,z->D:-X+1/2,Y-1/2,-Z-1 Nucleic acid-binding proteins Interaction Interface Pymol
e4dkaB1 B:x,y,z->B:X,Y,Z-1 Immunoglobulin-related Interaction Interface Pymol
e4dkaB1 B:X,Y,Z-1->B:x,y,z Immunoglobulin-related Interaction Interface Pymol
e4dkaA1 B:x,y,z->A:-X+1/2,Y-1/2,-Z Immunoglobulin-related Interaction Interface Pymol