ECOD: domain e4dkfB1

Domain ID e4dkfB1

A: alpha bundles
X: Ferritin/Heme oxygenase/4-helical cytokines
H: 4-helical cytokines
T: 4-helical cytokines
F: IL34

UID:	000981341
Type:	Automatic domain
Parent:	e4dkcA1
Range:	B:18-178
PDB:	4dkf
PDB Description:	INTERLEUKIN-34
UniProt:	Q6ZMJ4
Hsap BLAST neighbor:	Q6ZMJ4
Species:	Homo sapiens

Domains in the same chain:

Download Pymol

e4dkfB1	B:18-178	Ferritin/Heme oxygenase/4-helical cytokines	4-helical cytokines	4-helical cytokines

Domains in the same PDB:

e4dkfA1	A:18-178	Ferritin/Heme oxygenase/4-helical cytokines	4-helical cytokines	4-helical cytokines
e4dkfB1	B:18-178	Ferritin/Heme oxygenase/4-helical cytokines	4-helical cytokines	4-helical cytokines
e4dkfH1	H:1-113	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4dkfH2	H:114-213	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4dkfI4	I:2-113	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4dkfI3	I:114-210	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4dkfL1	L:1-107	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4dkfL2	L:108-214	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4dkfM1	M:1-107	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4dkfM2	M:108-214	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Structural contacts of domain e4dkfB1 of H-group "4-helical cytokines":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e4dkfA1	B:x,y,z->A:X,Y,Z	4-helical cytokines	Interaction Interface Pymol
e4dkfI4	B:X,Y,Z->I:x,y,z	Immunoglobulin-related	Interaction Interface Pymol
e4dkfM1	B:X,Y,Z->M:x,y,z	Immunoglobulin-related	Interaction Interface Pymol
e4dkfL1	B:X,Y,Z->L:x,y,z	Immunoglobulin-related	Interaction Interface Pymol
e4dkfA1	B:x,y,z->A:X,Y,Z-1	4-helical cytokines	Interaction Interface Pymol
e4dkfB1	B:x,y,z->B:-X+1,Y,-Z	4-helical cytokines	Interaction Interface Pymol
e4dkfB1	B:-X+1,Y,-Z->B:x,y,z	4-helical cytokines	Interaction Interface Pymol