Domain ID e4dkiB6

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  • A: a+b two layers
  • X: ClpS-like
  • H: Penicillin binding protein ClpS-like domain
  • T: Penicillin binding protein ClpS-like domain
  • F: Unmapped domains
UID: 001278509
Type: Automatic domain
Parent: e1vqqA6
Range: B:168-238
Ligands: CD CL
PDB: 4dki
PDB Description: PENICILLIN-BINDING PROTEIN 2'
UniProt: Q5HJW3
Species:

Structure of domain e4dkiB6

Domains in the same chain:

e4dkiB7 B:25-138 Cystatin-like NTF2-like NTF2-like
e4dkiB5 B:139-167,B:239-326 Penicillin binding protein dimerisation domain Penicillin binding protein dimerisation domain Penicillin binding protein dimerisation domain
e4dkiB6 B:168-238 ClpS-like Penicillin binding protein ClpS-like domain Penicillin binding protein ClpS-like domain
e4dkiB2 B:327-398,B:525-668 Profilin-like a+b domain in beta-lactamase/transpeptidase-like proteins a+b domain in beta-lactamase/transpeptidase-like proteins
e4dkiB1 B:399-524 alpha-helical domain in beta-lactamase/transpeptidase-like proteins alpha-helical domain in beta-lactamase/transpeptidase-like proteins alpha-helical domain in beta-lactamase/transpeptidase-like proteins

Domains in the same PDB:

e4dkiA7 A:25-138 Cystatin-like NTF2-like NTF2-like
e4dkiA5 A:139-167,A:239-326 Penicillin binding protein dimerisation domain Penicillin binding protein dimerisation domain Penicillin binding protein dimerisation domain
e4dkiA6 A:168-238 ClpS-like Penicillin binding protein ClpS-like domain Penicillin binding protein ClpS-like domain
e4dkiA2 A:327-398,A:525-668 Profilin-like a+b domain in beta-lactamase/transpeptidase-like proteins a+b domain in beta-lactamase/transpeptidase-like proteins
e4dkiA1 A:399-524 alpha-helical domain in beta-lactamase/transpeptidase-like proteins alpha-helical domain in beta-lactamase/transpeptidase-like proteins alpha-helical domain in beta-lactamase/transpeptidase-like proteins
e4dkiB7 B:25-138 Cystatin-like NTF2-like NTF2-like
e4dkiB5 B:139-167,B:239-326 Penicillin binding protein dimerisation domain Penicillin binding protein dimerisation domain Penicillin binding protein dimerisation domain
e4dkiB6 B:168-238 ClpS-like Penicillin binding protein ClpS-like domain Penicillin binding protein ClpS-like domain
e4dkiB2 B:327-398,B:525-668 Profilin-like a+b domain in beta-lactamase/transpeptidase-like proteins a+b domain in beta-lactamase/transpeptidase-like proteins
e4dkiB1 B:399-524 alpha-helical domain in beta-lactamase/transpeptidase-like proteins alpha-helical domain in beta-lactamase/transpeptidase-like proteins alpha-helical domain in beta-lactamase/transpeptidase-like proteins

Structural contacts of domain e4dkiB6 of H-group "Penicillin binding protein ClpS-like domain":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4dkiA5 B:x,y,z->A:X,Y,Z Penicillin binding protein dimerisation domain Interaction Interface Pymol
e4dkiA7 B:x,y,z->A:X,Y,Z NTF2-like Interaction Interface Pymol
e4dkiA6 B:x,y,z->A:X-1,Y,Z Penicillin binding protein ClpS-like domain Interaction Interface Pymol
e4dkiA1 B:-X,Y-1/2,-Z+1/2->A:x,y,z alpha-helical domain in beta-lactamase/transpeptidase-like proteins Interaction Interface Pymol
e4dkiA7 B:x,y,z->A:X-1/2,-Y+1/2,-Z NTF2-like Interaction Interface Pymol