ECOD: domain e4dkmE1

Domain ID e4dkmE1

A: beta barrels
X: GFP-like
H: GFP-like
T: GFP-like
F: GFP

UID:	001015109
Type:	Automatic domain
Parent:	e1oxdA1
Range:	E:3-218
PDB:	4dkm
PDB Description:	AMPHIOXUS GREEN FLUORESCENT PROTEIN, GFPC1A
UniProt:	C3YRA3
Species:	Branchiostoma floridae

Domains in the same chain:

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e4dkmE1	E:3-218	GFP-like	GFP-like	GFP-like

Domains in the same PDB:

e4dkmA1	A:3-218	GFP-like	GFP-like	GFP-like
e4dkmB1	B:3-218	GFP-like	GFP-like	GFP-like
e4dkmC1	C:3-218	GFP-like	GFP-like	GFP-like
e4dkmD1	D:3-218	GFP-like	GFP-like	GFP-like
e4dkmE1	E:3-218	GFP-like	GFP-like	GFP-like
e4dkmF1	F:3-218	GFP-like	GFP-like	GFP-like
e4dkmG1	G:3-218	GFP-like	GFP-like	GFP-like
e4dkmH1	H:3-218	GFP-like	GFP-like	GFP-like

Structural contacts of domain e4dkmE1 of H-group "GFP-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e4dkmC1	E:x,y,z->C:X,Y,Z	GFP-like	Interaction Interface Pymol
e4dkmH1	E:-X-1,Y,-Z-2->H:x,y,z	GFP-like	Interaction Interface Pymol
e4dkmA1	E:x,y,z->A:-X-1,Y,-Z-1	GFP-like	Interaction Interface Pymol
e4dkmD1	E:x,y,z->D:-X-1,Y,-Z-2	GFP-like	Interaction Interface Pymol
e4dkmA1	E:x,y,z->A:X,Y,Z	GFP-like	Interaction Interface Pymol
e4dkmG1	E:-X-1/2,Y-1/2,-Z-1->G:x,y,z	GFP-like	Interaction Interface Pymol