Domain ID e4dknB1

Download files:
  • A: beta barrels
  • X: GFP-like
  • H: GFP-like
  • T: GFP-like
  • F: GFP
UID: 001005063
Type: Automatic domain
Parent: e1oxdA1
Range: B:2-218
PDB: 4dkn
PDB Description: AMPHIOXUS GREEN FLUORESCENT PROTEIN, GFPA1
UniProt: C3YKQ3
Species: Branchiostoma floridae

Structure of domain e4dknB1

Domains in the same chain:

e4dknB1 B:2-218 GFP-like GFP-like GFP-like

Domains in the same PDB:

e4dknA1 A:-3-207 GFP-like GFP-like GFP-like
e4dknB1 B:2-218 GFP-like GFP-like GFP-like

Structural contacts of domain e4dknB1 of H-group "GFP-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4dknB1 B:x,y,z->B:-X,Y,-Z-1/2 GFP-like Interaction Interface Pymol
e4dknB1 B:-X,Y,-Z-1/2->B:x,y,z GFP-like Interaction Interface Pymol
e4dknA1 B:x,y,z->A:X,Y,Z GFP-like Interaction Interface Pymol
e4dknA1 B:X-1/2,-Y-1/2,-Z->A:x,y,z GFP-like Interaction Interface Pymol
e4dknA1 B:x,y,z->A:X-1/2,-Y-1/2,-Z GFP-like Interaction Interface Pymol
e4dknA1 B:X-1/2,Y+1/2,Z->A:x,y,z GFP-like Interaction Interface Pymol
e4dknA1 B:x,y,z->A:-X,Y,-Z-1/2 GFP-like Interaction Interface Pymol
e4dknA1 B:x,y,z->A:-X+1/2,Y-1/2,-Z-1/2 GFP-like Interaction Interface Pymol
e4dknB1 B:x,y,z->B:-X+1,Y,-Z-1/2 GFP-like Interaction Interface Pymol
e4dknB1 B:-X+1,Y,-Z-1/2->B:x,y,z GFP-like Interaction Interface Pymol