Domain ID e4dopB5

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  • A: alpha bundles
  • X: Helical bundle domain in CusB
  • H: Helical bundle domain in CusB
  • T: Helical bundle domain in CusB
  • F: HlyD_D4
UID: 001016548
Type: Automatic domain
Parent: e3h94A4
Range: B:157-205
PDB: 4dop
PDB Description: Cation efflux system protein CusB
UniProt: P77239
Species:

Structure of domain e4dopB5

Domains in the same chain:

Download Pymol

e4dopB1 B:79-103,B:323-400 cradle loop barrel RIFT-related Alanine racemase-C
e4dopB2 B:104-118,B:242-322 cradle loop barrel RIFT-related Alanine racemase-C
e4dopB4 B:119-154,B:208-241 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e4dopB5 B:157-205 Helical bundle domain in CusB Helical bundle domain in CusB Helical bundle domain in CusB

Domains in the same PDB:

e4dopA6 A:1-41,A:328-504 Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain
e4dopA7 A:42-134 Alpha-beta plaits Ferredoxin domains in multidrug efflux transporter Multidrug efflux transporter AcrB pore domain
e4dopA8 A:135-184,A:270-327 Alpha-beta plaits Ferredoxin domains in multidrug efflux transporter Multidrug efflux transporter AcrB pore domain
e4dopA5 A:185-269 Alpha-beta plaits Ferredoxin domains in multidrug efflux transporter Multidrug efflux transporter AcrB TolC docking domain
e4dopA4 A:517-564,A:862-1043 Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain
e4dopA3 A:565-677 Alpha-beta plaits Ferredoxin domains in multidrug efflux transporter Multidrug efflux transporter AcrB pore domain
e4dopA1 A:677-722,A:809-861 Alpha-beta plaits Ferredoxin domains in multidrug efflux transporter Multidrug efflux transporter AcrB pore domain
e4dopA2 A:721-809 Alpha-beta plaits Ferredoxin domains in multidrug efflux transporter Multidrug efflux transporter AcrB TolC docking domain
e4dopB1 B:79-103,B:323-400 cradle loop barrel RIFT-related Alanine racemase-C
e4dopB2 B:104-118,B:242-322 cradle loop barrel RIFT-related Alanine racemase-C
e4dopB4 B:119-154,B:208-241 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e4dopB5 B:157-205 Helical bundle domain in CusB Helical bundle domain in CusB Helical bundle domain in CusB
e4dopC1 C:79-103,C:323-400 cradle loop barrel RIFT-related Alanine racemase-C
e4dopC2 C:104-118,C:242-322 cradle loop barrel RIFT-related Alanine racemase-C
e4dopC4 C:119-154,C:208-241 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e4dopC5 C:157-205 Helical bundle domain in CusB Helical bundle domain in CusB Helical bundle domain in CusB

Structural contacts of domain e4dopB5 of H-group "Helical bundle domain in CusB":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4dopC4 B:X,Y,Z->C:x,y,z alpha/beta-Hammerhead/Barrel-sandwich hybrid Interaction Interface Pymol
e4dopC1 B:-X-1/3,-X+Y-2/3,-Z+1/3->C:x,y,z RIFT-related Interaction Interface Pymol