Domain ID e4doyB16

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  • A: alpha bundles
  • X: Bromodomain-like
  • H: Acyl-CoA dehydrogenase C-terminal domain-like
  • T: Acyl-CoA dehydrogenase C-terminal domain-like
  • F: Acyl-CoA_dh_2
UID: 001234483
Type: Automatic domain
Parent: e4doyA1
Range: B:237-417
Ligands: GOL
PDB: 4doy
PDB Description: Dibenzothiophene desulfurization enzyme C
UniProt: Q6WNP1
Species: Rhodococcus sp. XP

Structure of domain e4doyB16

Domains in the same chain:

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e4doyB18 B:18-124 Acyl-CoA dehydrogenase N-terminal domain-like Acyl-CoA dehydrogenase N-terminal domain-like Acyl-CoA dehydrogenase N-terminal domain-like
e4doyB17 B:125-236 Acyl-CoA dehydrogenase middle domain-like Acyl-CoA dehydrogenase middle domain-like Acyl-CoA dehydrogenase middle domain-like
e4doyB16 B:237-417 Bromodomain-like Acyl-CoA dehydrogenase C-terminal domain-like Acyl-CoA dehydrogenase C-terminal domain-like

Domains in the same PDB:

e4doyA3 A:18-124 Acyl-CoA dehydrogenase N-terminal domain-like Acyl-CoA dehydrogenase N-terminal domain-like Acyl-CoA dehydrogenase N-terminal domain-like
e4doyA2 A:125-239 Acyl-CoA dehydrogenase middle domain-like Acyl-CoA dehydrogenase middle domain-like Acyl-CoA dehydrogenase middle domain-like
e4doyA1 A:240-417 Bromodomain-like Acyl-CoA dehydrogenase C-terminal domain-like Acyl-CoA dehydrogenase C-terminal domain-like
e4doyB18 B:18-124 Acyl-CoA dehydrogenase N-terminal domain-like Acyl-CoA dehydrogenase N-terminal domain-like Acyl-CoA dehydrogenase N-terminal domain-like
e4doyB17 B:125-236 Acyl-CoA dehydrogenase middle domain-like Acyl-CoA dehydrogenase middle domain-like Acyl-CoA dehydrogenase middle domain-like
e4doyB16 B:237-417 Bromodomain-like Acyl-CoA dehydrogenase C-terminal domain-like Acyl-CoA dehydrogenase C-terminal domain-like
e4doyC18 C:18-124 Acyl-CoA dehydrogenase N-terminal domain-like Acyl-CoA dehydrogenase N-terminal domain-like Acyl-CoA dehydrogenase N-terminal domain-like
e4doyC17 C:125-236 Acyl-CoA dehydrogenase middle domain-like Acyl-CoA dehydrogenase middle domain-like Acyl-CoA dehydrogenase middle domain-like
e4doyC16 C:237-417 Bromodomain-like Acyl-CoA dehydrogenase C-terminal domain-like Acyl-CoA dehydrogenase C-terminal domain-like
e4doyD12 D:18-124 Acyl-CoA dehydrogenase N-terminal domain-like Acyl-CoA dehydrogenase N-terminal domain-like Acyl-CoA dehydrogenase N-terminal domain-like
e4doyD11 D:125-236 Acyl-CoA dehydrogenase middle domain-like Acyl-CoA dehydrogenase middle domain-like Acyl-CoA dehydrogenase middle domain-like
e4doyD10 D:237-417 Bromodomain-like Acyl-CoA dehydrogenase C-terminal domain-like Acyl-CoA dehydrogenase C-terminal domain-like
e4doyE18 E:18-124 Acyl-CoA dehydrogenase N-terminal domain-like Acyl-CoA dehydrogenase N-terminal domain-like Acyl-CoA dehydrogenase N-terminal domain-like
e4doyE17 E:125-237 Acyl-CoA dehydrogenase middle domain-like Acyl-CoA dehydrogenase middle domain-like Acyl-CoA dehydrogenase middle domain-like
e4doyE16 E:238-417 Bromodomain-like Acyl-CoA dehydrogenase C-terminal domain-like Acyl-CoA dehydrogenase C-terminal domain-like
e4doyF18 F:18-124 Acyl-CoA dehydrogenase N-terminal domain-like Acyl-CoA dehydrogenase N-terminal domain-like Acyl-CoA dehydrogenase N-terminal domain-like
e4doyF17 F:125-236 Acyl-CoA dehydrogenase middle domain-like Acyl-CoA dehydrogenase middle domain-like Acyl-CoA dehydrogenase middle domain-like
e4doyF16 F:237-417 Bromodomain-like Acyl-CoA dehydrogenase C-terminal domain-like Acyl-CoA dehydrogenase C-terminal domain-like
e4doyG18 G:18-124 Acyl-CoA dehydrogenase N-terminal domain-like Acyl-CoA dehydrogenase N-terminal domain-like Acyl-CoA dehydrogenase N-terminal domain-like
e4doyG17 G:125-236 Acyl-CoA dehydrogenase middle domain-like Acyl-CoA dehydrogenase middle domain-like Acyl-CoA dehydrogenase middle domain-like
e4doyG16 G:237-417 Bromodomain-like Acyl-CoA dehydrogenase C-terminal domain-like Acyl-CoA dehydrogenase C-terminal domain-like
e4doyH18 H:18-124 Acyl-CoA dehydrogenase N-terminal domain-like Acyl-CoA dehydrogenase N-terminal domain-like Acyl-CoA dehydrogenase N-terminal domain-like
e4doyH17 H:125-236 Acyl-CoA dehydrogenase middle domain-like Acyl-CoA dehydrogenase middle domain-like Acyl-CoA dehydrogenase middle domain-like
e4doyH16 H:237-417 Bromodomain-like Acyl-CoA dehydrogenase C-terminal domain-like Acyl-CoA dehydrogenase C-terminal domain-like

Structural contacts of domain e4doyB16 of H-group "Acyl-CoA dehydrogenase C-terminal domain-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4doyE17 B:X,Y,Z->E:x,y,z Acyl-CoA dehydrogenase middle domain-like Interaction Interface Pymol
e4doyE16 B:X,Y,Z->E:x,y,z Acyl-CoA dehydrogenase C-terminal domain-like Interaction Interface Pymol
e4doyC16 B:X,Y,Z->C:x,y,z Acyl-CoA dehydrogenase C-terminal domain-like Interaction Interface Pymol
e4doyF16 B:X-1,Y-1,Z-1->F:x,y,z Acyl-CoA dehydrogenase C-terminal domain-like Interaction Interface Pymol
e4doyF17 B:X-1,Y-1,Z-1->F:x,y,z Acyl-CoA dehydrogenase middle domain-like Interaction Interface Pymol
e4doyA1 B:x,y,z->A:X,Y,Z Acyl-CoA dehydrogenase C-terminal domain-like Interaction Interface Pymol
e4doyD10 B:X-1,Y-1,Z-1->D:x,y,z Acyl-CoA dehydrogenase C-terminal domain-like Interaction Interface Pymol