Domain ID e4dpxA5

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  • A: a+b two layers
  • X: Ribosomal protein S5 domain 2-like
  • H: Ribosomal protein S5 domain 2-like
  • T: Ribosomal protein S5 domain 2-like
  • F: MVD-like_N
UID: 001202444
Type: Automatic domain
Parent: e1fi4A2
Range: A:-2-168
Ligands: FMT GOL
PDB: 4dpx
PDB Description: MEVALONATE DIPHOSPHATE DECARBOXYLASE
UniProt: Q9FD73
Hsap BLAST neighbor: P53602
Species: Staphylococcus epidermidis

Structure of domain e4dpxA5

Structural contacts of domain e4dpxA5 of H-group "Ribosomal protein S5 domain 2-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4dpxB6 A:X,Y,Z->B:x,y,z GHMP Kinase, C-terminal domain Interaction Interface Pymol
e4dpxB5 A:X,Y,Z->B:x,y,z Ribosomal protein S5 domain 2-like Interaction Interface Pymol
e4dpxB5 A:-X-1,Y,-Z-1/2->B:x,y,z Ribosomal protein S5 domain 2-like Interaction Interface Pymol
e4dpxB6 A:-X-1,Y,-Z-1/2->B:x,y,z GHMP Kinase, C-terminal domain Interaction Interface Pymol
e4dpxB5 A:x,y,z->B:-X-1/2,Y-1/2,-Z-1/2 Ribosomal protein S5 domain 2-like Interaction Interface Pymol
e4dpxA6 A:x,y,z->A:X-1/2,Y-1/2,Z GHMP Kinase, C-terminal domain Interaction Interface Pymol
e4dpxB5 A:-X-1/2,-Y+1/2,Z-1/2->B:x,y,z Ribosomal protein S5 domain 2-like Interaction Interface Pymol