Domain ID e4dtpA5

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  • A: alpha bundles
  • X: "thumb" domain in bacteriophage RB69-like DNA polymerase I
  • H: "thumb" domain in bacteriophage RB69-like DNA polymerase I
  • T: "thumb" domain in bacteriophage RB69-like DNA polymerase I
  • F: Unmapped domains
UID: 001256857
Type: Automatic domain
Parent: e1ih7A2
Range: A:733-903
PDB: 4dtp
PDB Description: DNA polymerase
UniProt: Q38087
Species: Enterobacteria phage RB69

Structure of domain e4dtpA5

Structural contacts of domain e4dtpA5 of H-group ""thumb" domain in bacteriophage RB69-like DNA polymerase I":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4dtpA6 A:x,y,z->A:-X,Y-1/2,-Z-1/2 "fingers" domain in bacteriophage RB69-like DNA polymerase I Interaction Interface Pymol
e4dtpA4 A:-X,Y-1/2,-Z-1/2->A:x,y,z Ribonuclease H-like Interaction Interface Pymol
e4dtpA7 A:x,y,z->A:X-1/2,-Y+1/2,-Z Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol
e4dtpA4 A:x,y,z->A:X-1,Y,Z Ribonuclease H-like Interaction Interface Pymol
e4dtpA4 A:x,y,z->A:X-1/2,-Y+1/2,-Z-1 Ribonuclease H-like Interaction Interface Pymol