Domain ID e4durB1

Download files:
  • A: beta barrels
  • X: cradle loop barrel
  • H: RIFT-related
  • T: FMN-binding split barrel 2
  • F: Trypsin
UID: 001139507
Type: Automatic domain
Parent: e3gch.1
Range: B:547-791
Ligands: BCT CL
PDB: 4dur
PDB Description: PLASMINOGEN
UniProt: P00747
Hsap BLAST neighbor: P00747
Species: Homo sapiens

Structure of domain e4durB1

Domains in the same chain:

e4durB7 B:2-82 Hairpin loop containing domain-like Hairpin loop containing domain-like Hairpin loop containing domain-like
e4durB6 B:83-163 Kringle-like Kringle-like Kringle-like
e4durB3 B:164-250 Kringle-like Kringle-like Kringle-like
e4durB4 B:251-335 Kringle-like Kringle-like Kringle-like
e4durB5 B:345-447 Kringle-like Kringle-like Kringle-like
e4durB2 B:458-546 Kringle-like Kringle-like Kringle-like
e4durB1 B:547-791 cradle loop barrel RIFT-related FMN-binding split barrel 2

Domains in the same PDB:

e4durA6 A:3-80 Hairpin loop containing domain-like Hairpin loop containing domain-like Hairpin loop containing domain-like
e4durA5 A:81-161 Kringle-like Kringle-like Kringle-like
e4durA1 A:162-248 Kringle-like Kringle-like Kringle-like
e4durA7 A:249-332 Kringle-like Kringle-like Kringle-like
e4durA3 A:333-425 Kringle-like Kringle-like Kringle-like
e4durA2 A:426-435,A:460-541 Kringle-like Kringle-like Kringle-like
e4durA4 A:542-791 cradle loop barrel RIFT-related FMN-binding split barrel 2
e4durB7 B:2-82 Hairpin loop containing domain-like Hairpin loop containing domain-like Hairpin loop containing domain-like
e4durB6 B:83-163 Kringle-like Kringle-like Kringle-like
e4durB3 B:164-250 Kringle-like Kringle-like Kringle-like
e4durB4 B:251-335 Kringle-like Kringle-like Kringle-like
e4durB5 B:345-447 Kringle-like Kringle-like Kringle-like
e4durB2 B:458-546 Kringle-like Kringle-like Kringle-like
e4durB1 B:547-791 cradle loop barrel RIFT-related FMN-binding split barrel 2

Structural contacts of domain e4durB1 of H-group "RIFT-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4durA2 B:x,y,z->A:X,Y,Z Kringle-like Interaction Interface Pymol
e4durA4 B:x,y,z->A:X,Y,Z RIFT-related Interaction Interface Pymol
e4durA1 B:Y-1,X,-Z->A:x,y,z Kringle-like Interaction Interface Pymol
e4durA5 B:X-Y,-Y+1,-Z+1/3->A:x,y,z Kringle-like Interaction Interface Pymol