Domain ID e4duwB15

Download files:
  • A: a/b barrels
  • X: TIM beta/alpha-barrel
  • H: TIM barrels
  • T: TIM barrels
  • F: Glyco_hydro_2_C
UID: 001158531
Type: Automatic domain
Parent: e1jz8A5
Range: B:334-625
Ligands: DMS LAK MG NA
PDB: 4duw
PDB Description: Beta-galactosidase
UniProt: P00722
Hsap BLAST neighbor: P08236
Species:

Structure of domain e4duwB15

Domains in the same chain:

Download Pymol

e4duwB17 B:9-219 jelly-roll Galactose-binding domain-like Galactose-binding domain-like
e4duwB19 B:220-333 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4duwB15 B:334-625 TIM beta/alpha-barrel TIM barrels TIM barrels
e4duwB18 B:626-730 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4duwB16 B:731-1023 Glycosyl hydrolase domain-like supersandwich supersandwich

Domains in the same PDB:

e4duwA1 A:9-219 jelly-roll Galactose-binding domain-like Galactose-binding domain-like
e4duwA2 A:220-333 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4duwA5 A:334-625 TIM beta/alpha-barrel TIM barrels TIM barrels
e4duwA3 A:626-730 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4duwA4 A:731-1023 Glycosyl hydrolase domain-like supersandwich supersandwich
e4duwB17 B:9-219 jelly-roll Galactose-binding domain-like Galactose-binding domain-like
e4duwB19 B:220-333 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4duwB15 B:334-625 TIM beta/alpha-barrel TIM barrels TIM barrels
e4duwB18 B:626-730 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4duwB16 B:731-1023 Glycosyl hydrolase domain-like supersandwich supersandwich
e4duwC17 C:9-219 jelly-roll Galactose-binding domain-like Galactose-binding domain-like
e4duwC19 C:220-333 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4duwC15 C:334-625 TIM beta/alpha-barrel TIM barrels TIM barrels
e4duwC18 C:626-730 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4duwC16 C:731-1023 Glycosyl hydrolase domain-like supersandwich supersandwich
e4duwD17 D:9-219 jelly-roll Galactose-binding domain-like Galactose-binding domain-like
e4duwD19 D:220-333 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4duwD15 D:334-625 TIM beta/alpha-barrel TIM barrels TIM barrels
e4duwD18 D:626-730 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4duwD16 D:731-1023 Glycosyl hydrolase domain-like supersandwich supersandwich

Structural contacts of domain e4duwB15 of H-group "TIM barrels":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4duwC15 B:X,Y,Z->C:x,y,z TIM barrels Interaction Interface Pymol
e4duwC19 B:X,Y,Z->C:x,y,z Immunoglobulin-related Interaction Interface Pymol
e4duwC17 B:X,Y,Z->C:x,y,z Galactose-binding domain-like Interaction Interface Pymol
e4duwA5 B:x,y,z->A:X,Y,Z TIM barrels Interaction Interface Pymol
e4duwC15 B:x,y,z->C:X-1/2,-Y+1/2,-Z TIM barrels Interaction Interface Pymol
e4duwC16 B:x,y,z->C:X-1/2,-Y+1/2,-Z supersandwich Interaction Interface Pymol