ECOD: domain e4dvyP3

Domain ID e4dvyP3

A: alpha bundles
X: Oncogenic effector CagA domain III
H: Oncogenic effector CagA domain III
T: Oncogenic effector CagA domain III
F: CagA_N

UID:	001117743
Type:	Manual and representative domain
Range:	P:681-824
PDB:	4dvy
PDB Description:	CYTOTOXICITY-ASSOCIATED IMMUNODOMINANT ANTIGEN
UniProt:	P55980
Species:

Domains in the same chain:

Download Pymol

e4dvyP1	P:24-221	Oncogenic effector CagA N-terminal domain	Oncogenic effector CagA N-terminal domain	Oncogenic effector CagA N-terminal domain
e4dvyP2	P:303-680	Oncogenic effector CagA meander beta sheet domain	Oncogenic effector CagA meander beta sheet domain	Oncogenic effector CagA meander beta sheet domain
e4dvyP3	P:681-824	Oncogenic effector CagA domain III	Oncogenic effector CagA domain III	Oncogenic effector CagA domain III

Domains in the same PDB:

e4dvyP1	P:24-221	Oncogenic effector CagA N-terminal domain	Oncogenic effector CagA N-terminal domain	Oncogenic effector CagA N-terminal domain
e4dvyP2	P:303-680	Oncogenic effector CagA meander beta sheet domain	Oncogenic effector CagA meander beta sheet domain	Oncogenic effector CagA meander beta sheet domain
e4dvyP3	P:681-824	Oncogenic effector CagA domain III	Oncogenic effector CagA domain III	Oncogenic effector CagA domain III

Structural contacts of domain e4dvyP3 of H-group "Oncogenic effector CagA domain III":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e4dvyP2	P:x,y,z->P:X-1/2,-Y+1/2,-Z-1/4	Oncogenic effector CagA meander beta sheet domain	Interaction Interface Pymol
e4dvyP3	P:x,y,z->P:-Y,-X,-Z-1/2	Oncogenic effector CagA domain III	Interaction Interface Pymol
e4dvyP3	P:-Y,-X,-Z-1/2->P:x,y,z	Oncogenic effector CagA domain III	Interaction Interface Pymol
e4dvyP2	P:-Y+1/2,X+1/2,Z+1/4->P:x,y,z	Oncogenic effector CagA meander beta sheet domain	Interaction Interface Pymol
e4dvyP1	P:-Y+1/2,X+1/2,Z+1/4->P:x,y,z	Oncogenic effector CagA N-terminal domain	Interaction Interface Pymol