Domain ID e4dxbB2

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  • A: a/b three-layered sandwiches
  • X: Periplasmic binding protein-like II
  • H: Periplasmic binding protein-like II
  • T: Periplasmic binding protein-like II
  • F: SBP_bac_1
UID: 001520093
Type: Automatic domain
Parent: e4dxbA4
Range: B:112-259
Ligands: ZN
PDB: 4dxb
PDB Description: Maltose-binding periplasmic protein, Beta-lactamase TEM chimera
UniProt: P0AEX9
Species: Escherichia coli

Structure of domain e4dxbB2

Domains in the same chain:

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e4dxbB4 B:1-112 Periplasmic binding protein-like II Periplasmic binding protein-like II Periplasmic binding protein-like II
e4dxbB2 B:112-259 Periplasmic binding protein-like II Periplasmic binding protein-like II Periplasmic binding protein-like II
e4dxbB3 B:321-422,B:536-636 Profilin-like a+b domain in beta-lactamase/transpeptidase-like proteins a+b domain in beta-lactamase/transpeptidase-like proteins
e4dxbB1 B:423-535 alpha-helical domain in beta-lactamase/transpeptidase-like proteins alpha-helical domain in beta-lactamase/transpeptidase-like proteins alpha-helical domain in beta-lactamase/transpeptidase-like proteins

Domains in the same PDB:

e4dxbA1 A:1-111,A:260-318,A:586-637 Periplasmic binding protein-like II Periplasmic binding protein-like II Periplasmic binding protein-like II
e4dxbA4 A:112-259 Periplasmic binding protein-like II Periplasmic binding protein-like II Periplasmic binding protein-like II
e4dxbA2 A:319-422,A:536-585 Profilin-like a+b domain in beta-lactamase/transpeptidase-like proteins a+b domain in beta-lactamase/transpeptidase-like proteins
e4dxbA3 A:423-535 alpha-helical domain in beta-lactamase/transpeptidase-like proteins alpha-helical domain in beta-lactamase/transpeptidase-like proteins alpha-helical domain in beta-lactamase/transpeptidase-like proteins
e4dxbB4 B:1-112 Periplasmic binding protein-like II Periplasmic binding protein-like II Periplasmic binding protein-like II
e4dxbB2 B:112-259 Periplasmic binding protein-like II Periplasmic binding protein-like II Periplasmic binding protein-like II
e4dxbB3 B:321-422,B:536-636 Profilin-like a+b domain in beta-lactamase/transpeptidase-like proteins a+b domain in beta-lactamase/transpeptidase-like proteins
e4dxbB1 B:423-535 alpha-helical domain in beta-lactamase/transpeptidase-like proteins alpha-helical domain in beta-lactamase/transpeptidase-like proteins alpha-helical domain in beta-lactamase/transpeptidase-like proteins

Structural contacts of domain e4dxbB2 of H-group "Periplasmic binding protein-like II":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4dxbB2 B:x,y,z->B:X-1,Y,Z Periplasmic binding protein-like II Interaction Interface Pymol
e4dxbB3 B:x,y,z->B:X-1,Y,Z a+b domain in beta-lactamase/transpeptidase-like proteins Interaction Interface Pymol
e4dxbB3 B:X-1,Y,Z->B:x,y,z a+b domain in beta-lactamase/transpeptidase-like proteins Interaction Interface Pymol
e4dxbB2 B:X-1,Y,Z->B:x,y,z Periplasmic binding protein-like II Interaction Interface Pymol
e4dxbA3 B:x,y,z->A:X-1,Y,Z+1 alpha-helical domain in beta-lactamase/transpeptidase-like proteins Interaction Interface Pymol
e4dxbA3 B:X,Y,Z-1->A:x,y,z alpha-helical domain in beta-lactamase/transpeptidase-like proteins Interaction Interface Pymol
e4dxbA3 B:X,Y,Z-1->A:x,y,z alpha-helical domain in beta-lactamase/transpeptidase-like proteins Interaction Interface Pymol