ECOD: domain e4dyjA2

Domain ID e4dyjA2

A: a/b barrels
X: TIM beta/alpha-barrel
H: TIM barrels
T: TIM barrels
F: Ala_racemase_N

UID:	000223311
Type:	Automatic domain
Parent:	e1bd0A2
Range:	A:49-280
Ligands:	GOL SO4
PDB:	4dyj
PDB Description:	broad specificity amino acid racemase
UniProt:	I6LNY0
Species:	Pseudomonas putida

Domains in the same chain:

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e4dyjA1	A:26-48,A:281-409	cradle loop barrel	RIFT-related	Alanine racemase-C
e4dyjA2	A:49-280	TIM beta/alpha-barrel	TIM barrels	TIM barrels

Domains in the same PDB:

e4dyjA1	A:26-48,A:281-409	cradle loop barrel	RIFT-related	Alanine racemase-C
e4dyjA2	A:49-280	TIM beta/alpha-barrel	TIM barrels	TIM barrels
e4dyjB4	B:26-48,B:281-409	cradle loop barrel	RIFT-related	Alanine racemase-C
e4dyjB3	B:49-280	TIM beta/alpha-barrel	TIM barrels	TIM barrels

Structural contacts of domain e4dyjA2 of H-group "TIM barrels":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e4dyjB4	A:X,Y,Z->B:x,y,z	RIFT-related	Interaction Interface Pymol
e4dyjA2	A:x,y,z->A:-X,Y,-Z	TIM barrels	Interaction Interface Pymol
e4dyjA2	A:-X,Y,-Z->A:x,y,z	TIM barrels	Interaction Interface Pymol
e4dyjB3	A:x,y,z->B:-X+1/2,Y-1/2,-Z	TIM barrels	Interaction Interface Pymol