ECOD: domain e4ebjA2

Domain ID e4ebjA2

A: alpha bundles
X: Four-helical up-and-down bundle
H: HEPN
T: Nucleotidyltransferase substrate binding subunit/domain
F: Ant-IIb_sub-bd

UID:	000149237
Type:	Automatic and representative domain
Range:	A:135-251
Ligands:	EDO SO4
PDB:	4ebj
PDB Description:	AMINOGLYCOSIDE NUCLEOTIDYLTRANSFERASE
UniProt:	D0E7M2
Species:	Pseudomonas aeruginosa

Domain
In chain context
In PDB context

Structure of domain e4ebjA2

Domains in the same chain:

Download Pymol

e4ebjA1	A:-6-134	Nucleotidyltransferase-like	Nucleotidyltransferase	Nucleotidyltransferase
e4ebjA2	A:135-251	Four-helical up-and-down bundle	HEPN	Nucleotidyltransferase substrate binding subunit/domain

Domains in the same PDB:

e4ebjA1	A:-6-134	Nucleotidyltransferase-like	Nucleotidyltransferase	Nucleotidyltransferase
e4ebjA2	A:135-251	Four-helical up-and-down bundle	HEPN	Nucleotidyltransferase substrate binding subunit/domain
e4ebjB2	B:-6-134	Nucleotidyltransferase-like	Nucleotidyltransferase	Nucleotidyltransferase
e4ebjB1	B:135-251	Four-helical up-and-down bundle	HEPN	Nucleotidyltransferase substrate binding subunit/domain

Structural contacts of domain e4ebjA2 of H-group "HEPN":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e4ebjB1	A:X,Y,Z->B:x,y,z	HEPN	Interaction Interface Pymol
e4ebjB2	A:X,Y,Z->B:x,y,z	Nucleotidyltransferase	Interaction Interface Pymol
e4ebjA1	A:x,y,z->A:-X+1,Y-1/2,-Z+1/2	Nucleotidyltransferase	Interaction Interface Pymol
e4ebjB2	A:-X+3/2,-Y+1,Z-1/2->B:x,y,z	Nucleotidyltransferase	Interaction Interface Pymol