Domain ID e4edrA3

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  • A: a/b three-layered sandwiches
  • X: HAD domain-like
  • H: HAD domain-related
  • T: Toprim domain
  • F: Toprim_2
UID: 000982011
Type: Automatic domain
Parent: e1nuiA3
Range: A:240-361
Ligands: BEN MN UTP
PDB: 4edr
PDB Description: DNA primase
UniProt: O05338
Species: Staphylococcus aureus

Structure of domain e4edrA3

Structural contacts of domain e4edrA3 of H-group "HAD domain-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4edrA4 A:x,y,z->A:X-Y,X,Z+1/6 helical domain in DNA primase DnaG catalytic core Interaction Interface Pymol
e4edrA3 A:x,y,z->A:X,Y,Z-1 HAD domain-related Interaction Interface Pymol
e4edrA4 A:x,y,z->A:X,Y,Z-1 helical domain in DNA primase DnaG catalytic core Interaction Interface Pymol
e4edrA3 A:X,Y,Z-1->A:x,y,z HAD domain-related Interaction Interface Pymol
e4edrA2 A:X,Y,Z-1->A:x,y,z N-terminal a+b domain in DNA primase core Interaction Interface Pymol