ECOD: domain e4ekjA3

Domain ID e4ekjA3

A: a/b barrels
X: TIM beta/alpha-barrel
H: TIM barrels
T: TIM barrels
F: Glyco_hydro_39

UID:	001171306
Type:	Automatic domain
Parent:	e1uhvA2
Range:	A:29-360
Ligands:	SO4
PDB:	4ekj
PDB Description:	BETA-XYLOSIDASE
UniProt:	Q9A5U0
Hsap BLAST neighbor:	P35475
Species:	Caulobacter vibrioides

Domains in the same chain:

Download Pymol

e4ekjA4	A:8-28,A:359-500	Glycosyl hydrolase domain-like	Glycosyl hydrolase domain	Glycosyl hydrolase domain
e4ekjA3	A:29-360	TIM beta/alpha-barrel	TIM barrels	TIM barrels

Domains in the same PDB:

e4ekjA4	A:8-28,A:359-500	Glycosyl hydrolase domain-like	Glycosyl hydrolase domain	Glycosyl hydrolase domain
e4ekjA3	A:29-360	TIM beta/alpha-barrel	TIM barrels	TIM barrels

Structural contacts of domain e4ekjA3 of H-group "TIM barrels":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e4ekjA4	A:x,y,z->A:-X-1/2,Y-1/2,-Z-1/4	Glycosyl hydrolase domain	Interaction Interface Pymol
e4ekjA3	A:x,y,z->A:-Y+1/2,X+1/2,Z-1/4	TIM barrels	Interaction Interface Pymol
e4ekjA3	A:-Y+1/2,X+1/2,Z-1/4->A:x,y,z	TIM barrels	Interaction Interface Pymol
e4ekjA4	A:-Y+1/2,X+1/2,Z-1/4->A:x,y,z	Glycosyl hydrolase domain	Interaction Interface Pymol
e4ekjA4	A:x,y,z->A:Y-1,X+1,-Z	Glycosyl hydrolase domain	Interaction Interface Pymol
e4ekjA4	A:Y-1,X+1,-Z->A:x,y,z	Glycosyl hydrolase domain	Interaction Interface Pymol
e4ekjA4	A:Y-1,X,-Z->A:x,y,z	Glycosyl hydrolase domain	Interaction Interface Pymol
e4ekjA4	A:X-1,Y,Z->A:x,y,z	Glycosyl hydrolase domain	Interaction Interface Pymol