Domain ID e4elmC2

Download files:
  • A: a+b two layers
  • X: MHC antigen-recognition domain
  • H: MHC antigen-recognition domain
  • T: MHC antigen-recognition domain
  • F: MHC_I_3
UID: 000980765
Type: Automatic domain
Parent: e1lqvA1
Range: C:1-175
Ligands: NAG PLM
PDB: 4elm
PDB Description: Antigen-presenting glycoprotein CD1d1
UniProt: P11609
Hsap BLAST neighbor: P15813
Species: Mus musculus

Structure of domain e4elmC2

Domains in the same chain:

e4elmC2 C:1-175 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e4elmC1 C:176-279 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Domains in the same PDB:

e4elmA2 A:2-179 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e4elmA1 A:180-279 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4elmB1 B:1-99 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4elmC2 C:1-175 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e4elmC1 C:176-279 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4elmD1 D:1-99 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4elmE4 E:3-120 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4elmE3 E:121-203 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4elmF4 F:2-118 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4elmF3 F:119-237 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4elmG4 G:4-120 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4elmG3 G:121-202 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4elmH4 H:3-117 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4elmH3 H:118-222 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Structural contacts of domain e4elmC2 of H-group "MHC antigen-recognition domain":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4elmD1 C:X,Y,Z->D:x,y,z Immunoglobulin-related Interaction Interface Pymol
e4elmF4 C:X,Y,Z->F:x,y,z Immunoglobulin-related Interaction Interface Pymol
e4elmA1 C:x,y,z->A:X,Y,Z Immunoglobulin-related Interaction Interface Pymol
e4elmE4 C:X,Y,Z->E:x,y,z Immunoglobulin-related Interaction Interface Pymol
e4elmH4 C:X,Y,Z-1->H:x,y,z Immunoglobulin-related Interaction Interface Pymol